Basic Information
Locus ID:
gene-BS78_06G104400
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 28113674 | 28116490 | - | gene-BS78_06G104400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.21 | 44,297.21 Da | 50.54 | 110.81 | 0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 19 | 58 | 2.4E-6 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 128 | 357 | 3.65E-9 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 17 | 68 | 3.79E-12 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 5 | 60 | 2.7E-7 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 67 | 389 | 1.9E-11 | IPR032675 |
| SMART | SM00256 | fbox_2 | 23 | 62 | 0.0046 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 17 | 53 | 10.318796 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G66310.1 | F-box/RNI-like/FBD-like domains-containing protein. | 0 |
| RefSeq | XP_022683200.1 | F-box/FBD/LRR-repeat protein At5g22700 isoform X2 [Setaria italica] | 0 |
| Q7X7A4 | MEIOTIC F-BOX protein MOF OS=Oryza sativa subsp. japonica OX=39947 GN=MOF PE=1 SV=2 | 0 | |
| TrEMBL | A0A368RP38 | F-box domain-containing protein OS=Setaria italica OX=4555 GN=SETIT_6G219100v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology