Basic Information
Locus ID:
gene-BS78_06G104300
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 28108719 | 28113006 | - | gene-BS78_06G104300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.29 | 47,865.58 Da | 50.34 | 97.03 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 18 | 56 | 6.7E-4 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 15 | 66 | 1.44E-9 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 146 | 357 | 2.0E-11 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 139 | 248 | 9.1E-7 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 16 | 64 | 3.7E-6 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 277 | 417 | 5.2E-6 | IPR032675 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G13985.1 | FBD-associated F-box protein. | 0 |
| RefSeq | XP_039819445.1 | MEIOTIC F-BOX protein MOF-like [Panicum virgatum] | 0 |
| Q7X7A4 | MEIOTIC F-BOX protein MOF OS=Oryza sativa subsp. japonica OX=39947 GN=MOF PE=1 SV=2 | 0 | |
| TrEMBL | K3YCW4 | F-box domain-containing protein OS=Setaria italica OX=4555 GN=SETIT_7G106900v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology