Basic Information
Locus ID:
gene-BS78_06G104200
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 28104887 | 28107035 | - | gene-BS78_06G104200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.66 | 47,062.69 Da | 50.88 | 98.18 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 25 | 64 | 1.8E-6 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 152 | 410 | 4.32E-13 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 23 | 73 | 2.88E-11 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 266 | 415 | 2.4E-7 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 142 | 230 | 2.4E-5 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 23 | 70 | 5.1E-6 | - |
| SMART | SM00256 | fbox_2 | 29 | 68 | 0.0021 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G16930.1 | F-box/RNI-like/FBD-like domains-containing protein. | 0 |
| RefSeq | XP_039818606.1 | MEIOTIC F-BOX protein MOF-like [Panicum virgatum] | 0 |
| Q7X7A4 | MEIOTIC F-BOX protein MOF OS=Oryza sativa subsp. japonica OX=39947 GN=MOF PE=1 SV=2 | 0 | |
| TrEMBL | A0A3L6Q5S2 | Putative FBD-associated F-box protein OS=Panicum miliaceum OX=4540 GN=C2845_PM15G09060 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology