Basic Information
Locus ID:
gene-BS78_06G104100
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 28100411 | 28103968 | - | gene-BS78_06G104100 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.89 | 50,339.45 Da | 48.00 | 95.45 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF81383 | F-box domain | 25 | 94 | 1.1E-10 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 152 | 372 | 8.63E-11 | - |
| Gene3D | G3DSA:1.20.1280.50 | - | 23 | 86 | 3.8E-7 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 123 | 423 | 4.2E-9 | IPR032675 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 24 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G56380.1 | F-box/RNI-like/FBD-like domains-containing protein. | 0 |
| RefSeq | XP_002447884.1 | putative FBD-associated F-box protein At5g38570 [Sorghum bicolor] | 0 |
| Q9FM93 | FBD-associated F-box protein At5g56380 OS=Arabidopsis thaliana OX=3702 GN=At5g56380 PE=2 SV=2 | 0 | |
| TrEMBL | C5Y8T8 | F-box domain-containing protein OS=Sorghum bicolor OX=4558 GN=SORBI_3006G088400 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology