Basic Information
Locus ID:
gene-BS78_06G103300
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 28015213 | 28018006 | - | gene-BS78_06G103300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.66 | 84,156.63 Da | 51.76 | 81.65 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 479 | 775 | 4.87121E-87 | - |
| Pfam | PF00069 | Protein kinase domain | 476 | 770 | 4.6E-38 | IPR000719 |
| SUPERFAMILY | SSF50985 | RCC1/BLIP-II | 94 | 319 | 1.7E-14 | IPR009091 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 454 | 773 | 6.47E-69 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 450 | 561 | 2.5E-27 | - |
| Gene3D | G3DSA:2.130.10.30 | - | 160 | 322 | 2.1E-10 | IPR009091 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 562 | 787 | 3.8E-49 | - |
| SMART | SM00220 | serkin_6 | 473 | 778 | 7.8E-26 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 473 | 777 | 36.583752 | IPR000719 |
| ProSiteProfiles | PS51318 | Twin arginine translocation (Tat) signal profile. | 1 | 38 | 7.679487 | IPR006311 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 610 | 622 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 479 | 501 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G47850.1 | CRINKLY4 related 4. | 0 |
| RefSeq | XP_025825028.1 | serine/threonine-protein kinase-like protein CCR4 [Panicum hallii] | 0 |
| Q9FIJ6 | Serine/threonine-protein kinase-like protein CCR4 OS=Arabidopsis thaliana OX=3702 GN=CCR4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3L6Q3R4 | Putative CRINKLY4-like receptor protein kinase family protein OS=Panicum miliaceum OX=4540 GN=C2845_PM15G08970 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology