Basic Information
Locus ID:
gene-BS78_06G073300
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 24270144 | 24273580 | - | gene-BS78_06G073300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.44 | 79,475.57 Da | 52.95 | 78.72 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 423 | 631 | 2.7E-49 | IPR000719 |
| Pfam | PF01657 | Salt stress response/antifungal | 182 | 262 | 2.9E-6 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 92 | 145 | 3.3E-10 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 408 | 698 | 1.19E-74 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 385 | 496 | 3.9E-30 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 55 | 147 | 1.4E-10 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 173 | 264 | 1.3E-12 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 497 | 703 | 1.2E-52 | - |
| SMART | SM00220 | serkin_6 | 422 | 695 | 6.0E-33 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 47 | 148 | 13.691751 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 157 | 264 | 13.800377 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 422 | 708 | 38.590778 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 428 | 450 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 540 | 552 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 290 | 325 | - | - |
| Coils | Coil | Coil | 452 | 472 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G05200.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 25. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_002447714.2 | cysteine-rich receptor-like protein kinase 25 [Sorghum bicolor] | 0 |
| Q9M0X5 | Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana OX=3702 GN=CRK25 PE=3 SV=1 | 0 | |
| TrEMBL | A0A1B6PKD5 | Protein kinase domain-containing protein OS=Sorghum bicolor OX=4558 GN=SORBI_3006G055000 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 4 | AH09.862, BH09.855, BH09.856, CH09.928 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_06G073300 |
| Poaceae | Zea mays | 2 | Zm00001eb421250_P001, Zm00001eb421270_P002 |