Basic Information
Locus ID:
gene-BS78_06G051900
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Mitochondrial protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 18028695 | 18081846 | - | gene-BS78_06G051900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.95 | 80,713.50 Da | 40.49 | 90.86 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 329 | 593 | 1.4E-52 | IPR000719 |
| Pfam | PF00635 | MSP (Major sperm protein) domain | 615 | 717 | 4.7E-17 | IPR000535 |
| Pfam | PF01657 | Salt stress response/antifungal | 35 | 134 | 1.0E-18 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 157 | 238 | 9.3E-9 | IPR002902 |
| SUPERFAMILY | SSF49354 | PapD-like | 608 | 723 | 6.28E-18 | IPR008962 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 319 | 600 | 7.15E-71 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 421 | 608 | 2.6E-50 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 29 | 136 | 9.5E-23 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 145 | 241 | 5.8E-13 | IPR038408 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 309 | 401 | 7.2E-23 | - |
| Gene3D | G3DSA:2.60.40.10 | Immunoglobulins | 609 | 731 | 1.9E-24 | IPR013783 |
| SMART | SM00220 | serkin_6 | 328 | 599 | 6.7E-37 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 328 | 601 | 36.993637 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 29 | 137 | 18.263063 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 142 | 241 | 13.420188 | IPR002902 |
| ProSiteProfiles | PS50202 | Major sperm protein (MSP) domain profile. | 612 | 732 | 16.810589 | IPR000535 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 462 | 474 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 334 | 355 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23150.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 7. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_037416245.1 | disease resistance protein RGA5-like [Triticum dicoccoides] | 0 |
| Q8L7G3 | Cysteine-rich receptor-like protein kinase 7 OS=Arabidopsis thaliana OX=3702 GN=CRK7 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0A9UIH8 | Protein kinase domain-containing protein OS=Arundo donax OX=35708 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 4 | BH05.3525, CH04.920, CH05.3680, Contig522.28 |
| Poaceae | Eleusine coracana subsp. coracana | 5 | gene-QOZ80_5AG0380720, gene-QOZ80_5BG0439080 ... |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.3HG0225170.1, HORVU.MOREX.r3.7HG0748020.1 |
| Poaceae | Lolium multiflorum | 4 | gene-QYE76_036867, gene-QYE76_036876, gene-QYE76_036884 ... |
| Poaceae | Paspalum vaginatum | 4 | gene-BS78_06G051900, gene-BS78_08G093000 ... |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0401585 |
| Poaceae | Thinopyrum elongatum | 2 | Tel2E01G157900, Tel7E01G940400 |
| Poaceae | Triticum dicoccoides | 7 | gene_TRIDC3AG004390, gene_TRIDC7AG075260 ... |
| Poaceae | Triticum aestivum | 20 | TraesCS3A02G073900.1, TraesCS3D02G522300.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb164620_P001 |