Basic Information
Locus ID:
gene-BS78_06G018400
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
FFAT motif binding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 3098004 | 3100955 | - | gene-BS78_06G018400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.52 | 52,633.98 Da | 42.55 | 86.14 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00635 | MSP (Major sperm protein) domain | 336 | 441 | 9.6E-18 | IPR000535 |
| Pfam | PF00069 | Protein kinase domain | 25 | 301 | 2.2E-44 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 7 | 304 | 1.19E-61 | IPR011009 |
| SUPERFAMILY | SSF49354 | PapD-like | 332 | 463 | 4.19E-23 | IPR008962 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 93 | 1.0E-21 | - |
| Gene3D | G3DSA:2.60.40.10 | Immunoglobulins | 328 | 460 | 3.8E-29 | IPR013783 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 113 | 320 | 1.1E-44 | - |
| SMART | SM00220 | serkin_6 | 22 | 314 | 6.9E-23 | IPR000719 |
| ProSiteProfiles | PS50202 | Major sperm protein (MSP) domain profile. | 335 | 458 | 18.296837 | IPR000535 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 22 | 304 | 34.16684 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 28 | 50 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 156 | 168 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G21410.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 29. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_021302974.1 | probable serine/threonine-protein kinase PBL28 [Sorghum bicolor] | 0 |
| O65405 | Cysteine-rich receptor-like protein kinase 28 OS=Arabidopsis thaliana OX=3702 GN=CRK28 PE=3 SV=2 | 0 | |
| TrEMBL | A0A1B6P5L4 | Protein kinase domain-containing protein OS=Sorghum bicolor OX=4558 GN=SORBI_3009G004900 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology