Basic Information
Locus ID:
gene-BS78_06G017700
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
A Receptor for Ubiquitination Targets
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 2980373 | 2981713 | + | gene-BS78_06G017700 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.39 | 49,215.51 Da | 49.11 | 81.34 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 22 | 58 | 3.9E-5 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 22 | 74 | 1.24E-12 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 19 | 78 | 3.9E-8 | - |
| SMART | SM00256 | fbox_2 | 21 | 62 | 0.0097 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 150 | 368 | 5.5E-20 | IPR017451 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_025825235.1 | F-box protein At3g07870-like [Panicum hallii] | 0 |
| TrEMBL | A0A2T8IBR4 | F-box domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_7G107100 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology