Basic Information
Locus ID:
gene-BS78_06G014700
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
A Receptor for Ubiquitination Targets
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 2299267 | 2302185 | - | gene-BS78_06G014700 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.00 | 53,945.91 Da | 61.92 | 95.57 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 51 | 86 | 1.3E-4 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 41 | 100 | 5.63E-10 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 46 | 88 | 9.6E-6 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 100 | 155 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 24 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 113 | 138 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_034579636.1 | uncharacterized protein LOC117843186 [Setaria viridis] | 0 |
| TrEMBL | C5X9I5 | F-box domain-containing protein OS=Sorghum bicolor OX=4558 GN=SORBI_3002G033600 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||