Basic Information
Locus ID:
gene-BS78_06G012700
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 1960329 | 1962745 | + | gene-BS78_06G012700 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.83 | 36,021.81 Da | 45.30 | 86.00 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 23 | 303 | 4.2E-48 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 10 | 306 | 3.05E-65 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 3 | 93 | 1.3E-23 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 113 | 315 | 4.2E-47 | - |
| SMART | SM00220 | serkin_6 | 22 | 308 | 1.2E-30 | IPR000719 |
| PIRSF | PIRSF000654 | ILK | 11 | 315 | 1.1E-29 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 22 | 306 | 36.569618 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 28 | 50 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 157 | 169 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G21410.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 29. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_021302974.1 | probable serine/threonine-protein kinase PBL28 [Sorghum bicolor] | 0 |
| O65405 | Cysteine-rich receptor-like protein kinase 28 OS=Arabidopsis thaliana OX=3702 GN=CRK28 PE=3 SV=2 | 0 | |
| TrEMBL | A0A3L6RWP9 | Protein kinase domain-containing protein OS=Panicum miliaceum OX=4540 GN=C2845_PM11G18150 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology