Basic Information
Locus ID:
gene-BS78_06G001800
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 428987 | 444384 | - | gene-BS78_06G001800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.77 | 107,044.40 Da | 39.41 | 89.56 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 636 | 902 | 7.60398E-98 | - |
| Pfam | PF00069 | Protein kinase domain | 633 | 897 | 1.4E-45 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 166 | 226 | 5.1E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 308 | 345 | 9.2E-8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 47 | 83 | 1.3E-5 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 616 | 917 | 9.43E-79 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 59 | 400 | 1.22E-51 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 201 | 305 | 3.1E-27 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 706 | 919 | 8.4E-56 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 306 | 419 | 2.3E-12 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 46 | 200 | 7.4E-34 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 600 | 705 | 3.8E-34 | - |
| SMART | SM00369 | LRR_typ_2 | 332 | 356 | 0.34 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 141 | 165 | 300.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 213 | 237 | 22.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 630 | 902 | 2.0E-41 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 630 | 902 | 37.898212 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 750 | 762 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 636 | 658 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 910 | 950 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G06840.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021318601.1 | probable LRR receptor-like serine/threonine-protein kinase At1g06840 [Sorghum bicolor] | 0 |
| C0LGD7 | Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana OX=3702 GN=At1g06840 PE=1 SV=2 | 0 | |
| TrEMBL | A0A835DXK0 | Protein kinase domain-containing protein OS=Digitaria exilis OX=1010633 GN=HU200_065221 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology