Basic Information
Locus ID:
gene-BS78_06G000700
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Protein of unknown function, DUF573
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 227618 | 238108 | + | gene-BS78_06G000700 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.85 | 70,314.44 Da | 44.53 | 72.79 | -0.77 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04504 | Protein of unknown function, DUF573 | 116 | 205 | 1.0E-12 | IPR007592 |
| Pfam | PF03017 | TNP1/EN/SPM transposase | 542 | 607 | 3.0E-16 | IPR004264 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 164 | 194 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 32 | 57 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 122 | - | - |
| Coils | Coil | Coil | 295 | 315 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_034602389.1 | uncharacterized protein LOC117862942 isoform X2 [Setaria viridis] | 0 |
| TrEMBL | A0A4U6TNK9 | Transposase_23 domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_7G035600v2 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology