Basic Information
Locus ID:
gene-BS78_05G279200
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 56576151 | 56586347 | - | gene-BS78_05G279200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.37 | 88,021.74 Da | 41.24 | 91.88 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 112 | 390 | 3.4E-36 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 425 | 703 | 1.7E-52 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 402 | 705 | 8.5E-73 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 85 | 392 | 7.07E-52 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 93 | 181 | 1.0E-17 | - |
| Gene3D | G3DSA:3.30.70.100 | - | 2 | 77 | 1.7E-17 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 516 | 724 | 3.2E-54 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 403 | 498 | 5.3E-26 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 204 | 402 | 7.2E-42 | - |
| SMART | SM00220 | serkin_6 | 424 | 708 | 2.7E-38 | IPR000719 |
| SMART | SM00220 | serkin_6 | 111 | 397 | 1.2E-12 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 111 | 397 | 28.315361 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 424 | 713 | 38.237431 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 430 | 453 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 559 | 571 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G00960.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_034592943.1 | tyrosine-protein kinase JAK2-like isoform X1 [Setaria viridis] | 0 |
| O23082 | Cysteine-rich receptor-like protein kinase 44 OS=Arabidopsis thaliana OX=3702 GN=CRK44 PE=3 SV=2 | 0 | |
| TrEMBL | A0A4V6Y8C3 | Protein kinase domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_5G209500v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.7HG0635950.1, HORVU.MOREX.r3.7HG0636000.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_05G279200 |
| Poaceae | Thinopyrum elongatum | 3 | Tel7E01G034800, Tel7E01G035000, Tel7E01G035100 |
| Poaceae | Triticum dicoccoides | 4 | gene_TRIDC4AG070310, gene_TRIDC4AG070370 ... |
| Poaceae | Triticum aestivum | 9 | TraesCS4A02G481200.1, TraesCS4A02G481300.1 ... |