Basic Information
Locus ID:
gene-BS78_05G264100
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
May serve as docking site to facilitate the association of other proteins to the plasma membrane
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 53839469 | 53842056 | - | gene-BS78_05G264100 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.68 | 13,726.46 Da | 27.16 | 88.44 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01814 | Ubl_MUBs_plant | 31 | 115 | 4.07051E-39 | - |
| Pfam | PF13881 | Ubiquitin-2 like Rad60 SUMO-like | 27 | 119 | 4.5E-31 | IPR039540 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 27 | 118 | 1.03E-20 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 14 | 121 | 7.3E-37 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 15 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 25 | - | - |
| Coils | Coil | Coil | 11 | 31 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G26980.1 | membrane-anchored ubiquitin-fold protein 4 precursor. | 0 |
| RefSeq | XP_002447712.1 | membrane-anchored ubiquitin-fold protein 4 [Sorghum bicolor] | 0 |
| Q7XRU4 | Membrane-anchored ubiquitin-fold protein 4 OS=Oryza sativa subsp. japonica OX=39947 GN=MUB4 PE=2 SV=2 | 0 | |
| TrEMBL | C5YEV4 | Membrane-anchored ubiquitin-fold protein OS=Sorghum bicolor OX=4558 GN=SORBI_3006G054500 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology