Basic Information
Locus ID:
gene-BS78_05G259200
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Wall-associated receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 53124602 | 53125669 | - | gene-BS78_05G259200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.80 | 39,686.23 Da | 36.45 | 95.21 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 44 | 259 | 4.1E-41 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 32 | 316 | 2.87E-62 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 121 | 329 | 5.7E-45 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 10 | 120 | 2.0E-23 | - |
| SMART | SM00220 | serkin_6 | 42 | 313 | 7.5E-25 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 42 | 318 | 31.354172 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 165 | 177 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G16120.1 | wall associated kinase-like 1. wall-associated kinase like | 0 |
| RefSeq | XP_034601174.1 | wall-associated receptor kinase-like 22 [Setaria viridis] | 0 |
| A0A1D6E0S8 | Wall-associated receptor kinase 17 OS=Zea mays OX=4577 GN=WAK17 PE=1 SV=1 | 0 | |
| TrEMBL | A0A059Q251 | Protein kinase domain-containing protein OS=Saccharum hybrid cultivar R570 OX=131158 GN=SHCRBa_201_F17_F_350 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_9AG0688840 |
| Poaceae | Paspalum vaginatum | 12 | gene-BS78_05G248600, gene-BS78_05G248800, gene-BS78_K280400 ... |
| Poaceae | Zea mays | 1 | Zm00001eb262530_P001 |