halophFGD

Basic Information

Locus ID: gene-BS78_05G258900

Species & Taxonomic ID: Paspalum vaginatum & 158149

Genome Assembly: GCA_026573395.1

Description: wall-associated receptor kinase-like

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr5	53084304	53085669	+	gene-BS78_05G258900

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.26	17,121.37 Da	64.47	79.25	0.11

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF13947	Wall-associated receptor kinase galacturonan-binding	56	124	3.5E-9	IPR025287

Gene Ontology

Molecular Function:

GO:0030247 (polysaccharide binding)

KEGG Pathway

KO Term:

K04733 (interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1])

Pathway:

ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) map04621 (NOD-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_042421257.1	wall-associated receptor kinase 2-like isoform X2 [Zingiber officinale]	0
TrEMBL	A0A059Q1R0	EGF-like domain-containing protein OS=Saccharum hybrid cultivar R570 OX=131158 GN=SHCRBa_201_F17_F_310 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Eleusine coracana subsp. coracana	1	gene-QOZ80_9AG0688840
Poaceae	Paspalum vaginatum	12	gene-BS78_05G248600, gene-BS78_05G248800, gene-BS78_K280400 ... gene-BS78_05G249700, gene-BS78_05G256500, gene-BS78_05G256800, gene-BS78_05G257500, gene-BS78_05G258900, gene-BS78_05G259000, gene-BS78_05G259200, gene-BS78_05G259500, gene-BS78_K280800
Poaceae	Zea mays	1	Zm00001eb262530_P001