Basic Information
Locus ID:
gene-BS78_05G257500
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Wall-associated receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 52874136 | 52890078 | - | gene-BS78_05G257500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.91 | 76,945.40 Da | 39.88 | 79.86 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 279 | 312 | 9.19846E-5 | - |
| Pfam | PF00069 | Protein kinase domain | 398 | 651 | 3.7E-36 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 382 | 681 | 4.86E-62 | IPR011009 |
| SUPERFAMILY | SSF57196 | EGF/Laminin | 279 | 313 | 7.62E-5 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 226 | 320 | 1.5E-8 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 364 | 463 | 5.3E-14 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 464 | 672 | 1.3E-47 | - |
| SMART | SM00179 | egfca_6 | 279 | 320 | 9.0E-4 | IPR001881 |
| SMART | SM00220 | serkin_6 | 398 | 656 | 3.9E-26 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 398 | 661 | 30.364792 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 508 | 520 | - | IPR008271 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 279 | 304 | - | IPR018097 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21270.1 | wall-associated kinase 2. cytoplasmic serine/threonine protein kinase induced by salicylic acid. mutant plants exhibit a loss of cell expansion and dependence on sugars and salts for seedling growth, affecting the expression and activity of vacuolar invertase. | 0 |
| RefSeq | XP_012702453.2 | wall-associated receptor kinase 2 [Setaria italica] | 0 |
| Q9LMP1 | Wall-associated receptor kinase 2 OS=Arabidopsis thaliana OX=3702 GN=WAK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A368RJV4 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 GN=SETIT_6G094100v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_9AG0688840 |
| Poaceae | Paspalum vaginatum | 12 | gene-BS78_05G248600, gene-BS78_05G248800, gene-BS78_K280400 ... |
| Poaceae | Zea mays | 1 | Zm00001eb262530_P001 |