Basic Information
Locus ID:
gene-BS78_05G255800
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Calmodulin binding protein-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 52673704 | 52683897 | - | gene-BS78_05G255800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.64 | 53,631.37 Da | 64.10 | 65.85 | -0.89 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07887 | Calmodulin binding protein-like | 164 | 300 | 2.3E-18 | IPR012416 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 133 | 154 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 12 | 39 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 133 | 153 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 40 | 58 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 69 | - | - |
| Coils | Coil | Coil | 101 | 121 | - | - |
| Coils | Coil | Coil | 73 | 93 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_022685149.1 | uncharacterized protein LOC101785068 isoform X2 [Setaria italica] | 0 |
| TrEMBL | A0A368SCE2 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 GN=SETIT_8G229200v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 3 | AH04.2165, CH04.2588, CH06.2103 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.3HG0306700.1 |
| Poaceae | Lolium multiflorum | 3 | gene-QYE76_058377, gene-QYE76_058984, gene-QYE76_058985 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_05G255700, gene-BS78_05G255800 |
| Poaceae | Thinopyrum elongatum | 7 | Tel3E01G641200, Tel3E01G641300, Tel3E01G896700 ... |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC3BG086480, gene_TRIDC3BG086490 |
| Poaceae | Triticum aestivum | 5 | TraesCS3A02G403500.1, TraesCS3B02G600600.1 ... |
| Poaceae | Zoysia japonica | 2 | nbis-gene-45984, nbis-gene-45985 |