Basic Information
Locus ID:
gene-BS78_05G251300
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 52107582 | 52109211 | - | gene-BS78_05G251300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.05 | 29,647.63 Da | 67.36 | 71.42 | -0.75 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | G3DSA:1.20.930.20 | - | 1 | 60 | 2.5E-6 | IPR036537 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 141 | 155 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 133 | 161 | - | - |
| Coils | Coil | Coil | 5 | 25 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_039771511.1 | uncharacterized protein LOC120639700 isoform X2 [Panicum virgatum] | 0 |
| TrEMBL | A0A2T7CQY3 | MCAfunc domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_8G250400 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 6 | AH04.2149, AH04.2150, AH06.444, BH04.2209, CH09.212 ... |
| Poaceae | Eleusine coracana subsp. coracana | 3 | gene-QOZ80_5AG0390620, gene-QOZ80_8AG0629730 ... |
| Poaceae | Hordeum vulgare | 3 | HORVU.MOREX.r3.3HG0315350.1, HORVU.MOREX.r3.3HG0315360.1 ... |
| Poaceae | Oryza sativa | 3 | LOC_Os12g14480.1, LOC_Os12g14610.1, LOC_Os12g14699.1 |
| Poaceae | Paspalum vaginatum | 16 | gene-BS78_05G233500, gene-BS78_05G233900, gene-BS78_K259300 ... |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0205570, Pt_Chr0205659 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr27G005670 |
| Poaceae | Thinopyrum elongatum | 1 | Tel1E01G066400 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC3BG074570 |
| Poaceae | Triticum aestivum | 4 | TraesCS1B02G036700.1, TraesCS1D02G030000.2 ... |
| Poaceae | Zoysia macrostachya | 2 | Zma_g25837, Zma_g25838 |