Basic Information
Locus ID:
gene-BS78_05G234100
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Protein MID1-COMPLEMENTING ACTIVITY
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 49794246 | 49800922 | + | gene-BS78_05G234100 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.91 | 66,090.79 Da | 41.18 | 86.98 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 263 | 527 | 7.32365E-93 | - |
| Pfam | PF00069 | Protein kinase domain | 260 | 523 | 2.5E-36 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 240 | 526 | 4.59E-68 | IPR011009 |
| Gene3D | G3DSA:1.20.930.20 | - | 19 | 126 | 1.8E-26 | IPR036537 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 234 | 332 | 1.6E-33 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 334 | 533 | 4.1E-45 | - |
| SMART | SM00220 | serkin_6 | 257 | 525 | 5.9E-13 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 257 | 533 | 31.580315 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 263 | 285 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 549 | 568 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 549 | 578 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G21390.1 | S-locus lectin protein kinase family protein. | 0 |
| RefSeq | XP_025826808.1 | G-type lectin S-receptor-like serine/threonine-protein kinase B120 isoform X3 [Panicum hallii] | 0 |
| O81906 | G-type lectin S-receptor-like serine/threonine-protein kinase B120 OS=Arabidopsis thaliana OX=3702 GN=B120 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2T7CQW2 | Protein kinase domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_8G248200 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 2 | BH05.3360, CH04.2550 |
| Poaceae | Eleusine coracana subsp. coracana | 3 | gene-QOZ80_9AG0692060, gene-QOZ80_9AG0692200 ... |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.7HG0642600.1 |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_065633, gene-QYE76_065634 |
| Poaceae | Paspalum vaginatum | 4 | gene-BS78_05G234100, gene-BS78_K259400, gene-BS78_K259700 ... |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0103436, Pt_Chr0103449 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr0G006690, Chr23G019530 |
| Poaceae | Thinopyrum elongatum | 1 | Tel7E01G121900 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC4AG064110, gene_TRIDC7AG005940 |
| Poaceae | Triticum aestivum | 2 | TraesCS4A02G433800.1, TraesCS7A02G056800.1 |
| Poaceae | Zea mays | 1 | Zm00001eb165320_P001 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g19130, Zma_g19133 |