Basic Information
Locus ID:
gene-BS78_05G227800
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Short Name:
NHX1
Description:
Belongs to the monovalent cation proton antiporter 1 (CPA1) transporter (TC 2.A.36) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 49036053 | 49040908 | - | gene-BS78_05G227800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.83 | 59,666.11 Da | 40.27 | 110.53 | 0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00999 | Sodium/hydrogen exchanger family | 26 | 442 | 1.0E-56 | IPR006153 |
| Gene3D | G3DSA:6.10.140.1330 | - | 144 | 195 | 6.4E-15 | - |
| TIGRFAM | TIGR00840 | b_cpa1: sodium/hydrogen exchanger 3 | 23 | 473 | 7.5E-78 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 82 | 93 | 4.0E-11 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 96 | 110 | 4.0E-11 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 151 | 161 | 4.0E-11 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 111 | 119 | 4.0E-11 | IPR004709 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G05030.1 | sodium hydrogen exchanger 2. member of Sodium proton exchanger family | 0 |
| RefSeq | XP_004979862.1 | sodium/hydrogen exchanger 2 [Setaria italica] | 0 |
| Q9SXJ8 | Sodium/hydrogen exchanger 1 OS=Oryza sativa subsp. japonica OX=39947 GN=NHX1 PE=2 SV=1 | 0 | |
| TrEMBL | K3ZHY4 | Sodium/hydrogen exchanger OS=Setaria italica OX=4555 GN=101785745 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology