Basic Information
Locus ID:
gene-BS78_05G225800
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 48800426 | 48802243 | - | gene-BS78_05G225800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.48 | 66,245.16 Da | 54.84 | 85.34 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 7 | 40 | 3.3E-4 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 5 | 44 | 8.63E-8 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 246 | 497 | 3.92E-10 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 257 | 525 | 1.0E-7 | IPR032675 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 206 | 224 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 160 | 242 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 184 | 205 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 160 | 183 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G59200.2 | - | 0 |
| RefSeq | XP_051229744.1 | uncharacterized protein LOC127347618 [Lolium perenne] | 0 |
| Q9LX51 | F-box/LRR-repeat protein At3g59200 OS=Arabidopsis thaliana OX=3702 GN=At3g59200 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3L6Q446 | F-box domain-containing protein OS=Panicum miliaceum OX=4540 GN=C2845_PM17G14020 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology