halophFGD

Basic Information

Locus ID: gene-BS78_05G224000

Species & Taxonomic ID: Paspalum vaginatum & 158149

Genome Assembly: GCA_026573395.1

Description: ADP binding

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr5	48616951	48626712	+	gene-BS78_05G224000

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
7.45	73,040.68 Da	48.38	94.37	-0.28

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd14798	RX-CC_like	13	131	1.49495E-9	IPR038005
Pfam	PF00931	NB-ARC domain	172	412	3.0E-45	IPR002182
Pfam	PF18052	Rx N-terminal domain	14	93	6.7E-18	IPR041118
SUPERFAMILY	SSF52058	L domain-like	484	642	6.8E-17	-
SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	154	425	8.77E-57	IPR027417
Gene3D	G3DSA:1.10.10.10	-	411	495	7.6E-13	IPR036388
Gene3D	G3DSA:1.20.5.4130	-	15	122	9.1E-17	-
Gene3D	G3DSA:3.40.50.300	-	149	321	1.1E-34	IPR027417
Gene3D	G3DSA:1.10.8.430	-	327	410	1.7E-9	IPR042197
Gene3D	G3DSA:3.80.10.10	Ribonuclease Inhibitor	506	644	2.8E-18	IPR032675
PRINTS	PR00364	Disease resistance protein signature	629	645	8.9E-18	-
PRINTS	PR00364	Disease resistance protein signature	266	280	8.9E-18	-
PRINTS	PR00364	Disease resistance protein signature	362	376	8.9E-18	-
PRINTS	PR00364	Disease resistance protein signature	192	207	8.9E-18	-
Coils	Coil	Coil	40	60	-	-

Gene Ontology

Molecular Function:

GO:0043531 (ADP binding)

Best hit

Source	Best Hit ID	Description
TAIR	AT3G14470.1	NB-ARC domain-containing disease resistance protein.
RefSeq	XP_021317837.1	putative disease resistance protein RGA1 [Sorghum bicolor]
Swiss-Prot	Q7XA40	Putative disease resistance protein RGA3 OS=Solanum bulbocastanum OX=147425 GN=RGA3 PE=2 SV=2
TrEMBL	A0A811QJ91	Disease resistance protein RGA3 OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS39503 PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	4	jg25372, jg25931, jg5627, jg98
Aizoaceae	Mesembryanthemum crystallinum	1	gene_8179
Amaranthaceae	Atriplex hortensis	5	Ah009863, Ah009889, Ah019076, Ah036058, Ah039075
Amaranthaceae	Beta vulgaris	3	BVRB_2g039430, BVRB_2g042620, BVRB_3g055850
Amaranthaceae	Salicornia bigelovii	4	Sbi_jg18650, Sbi_jg43699, Sbi_jg48544, Sbi_jg56270
Amaranthaceae	Salicornia europaea	3	Seu_jg16634, Seu_jg18383, Seu_jg18393
Amaranthaceae	Suaeda aralocaspica	3	GOSA_00001612, GOSA_00012760, GOSA_00020394
Amaranthaceae	Suaeda glauca	5	Sgl45205, Sgl49973, Sgl54057, Sgl59394, Sgl82219
Amaranthaceae	Chenopodium album	5	gene:ENSEOMG00000008443, gene:ENSEOMG00000021078 ... gene:ENSEOMG00000028941, gene:ENSEOMG00000031977, gene:ENSEOMG00000040147
Amaranthaceae	Chenopodium quinoa	13	CQ.Regalona.r1.2AG0011790, CQ.Regalona.r1.2AG0017450 ... CQ.Regalona.r1.2BG0005740, CQ.Regalona.r1.2BG0005770, CQ.Regalona.r1.2BG0014950, CQ.Regalona.r1.7BG0000380, CQ.Regalona.r1.7BG0016370, CQ.Regalona.r1.7BG0017810, CQ.Regalona.r1.8BG0011440, CQ.Regalona.r1.8BG0019630, CQ.Regalona.r1.9AG0012870, CQ.Regalona.r1.9AG0012990, CQ.Regalona.r1.9AG0020090
Anacardiaceae	Pistacia vera	7	pistato.v30051160, pistato.v30051420, pistato.v30053570 ... pistato.v30079740, pistato.v30231360, pistato.v30248360, pistato.v30248540
Apiaceae	Apium graveolens	1	Ag4G01102
Arecaceae	Cocos nucifera	4	scaffold010649G000010, scaffold013905G000010 ... scaffold020636G000020, scaffold026009G000010
Arecaceae	Phoenix dactylifera	1	gene-LOC113463296
Asteraceae	Flaveria trinervia	1	Ftri7G04826
Casuarinaceae	Casuarina equisetifolia	8	Ceq01G0210, Ceq01G0305, Ceq01G0319, Ceq01G0332, Ceq01G0588 ... Ceq01G0734, Ceq01G0754, Ceq05G1246
Casuarinaceae	Casuarina glauca	12	Cgl01G0168, Cgl01G0273, Cgl01G0275, Cgl01G0279, Cgl01G0282 ... Cgl01G0913, Cgl02G3035, Cgl04G2658, Cgl05G0270, Cgl06G0120, Cgl06G0205, Cgl09G0198
Hydrocharitaceae	Thalassia testudinum	1	gene.Thate01g21220
Malvaceae	Hibiscus hamabo Siebold & Zucc.	1	nbisL1-mrna-4453
Nitrariaceae	Nitraria sibirica	5	evm.TU.LG03.1911, evm.TU.LG05.1168, evm.TU.LG05.1170 ... evm.TU.LG06.1169, evm.TU.LG06.1185
Plantaginaceae	Plantago ovata	10	Pov_00009514, Pov_00016723, Pov_00016901, Pov_00019932 ... Pov_00020389, Pov_00023077, Pov_00025341, Pov_00034141, Pov_00034143, Pov_00041304
Poaceae	Echinochloa crus-galli	26	AH04.2257, AH04.2258, AH04.2259, AH04.2313, AH06.1, AH08.414 ... AH09.823, AH09.825, AH09.826, BH02.4507, BH04.931, BH04.948, BH05.3486, BH08.423, BH08.937, BH08.943, BH09.817, CH02.1404, CH04.1104, CH04.401, CH04.881, CH08.1067, CH08.1068, CH08.497, CH09.878, CH09.879
Poaceae	Eleusine coracana subsp. coracana	22	gene-QOZ80_1AG0003970, gene-QOZ80_1BG0052390 ... gene-QOZ80_1BG0052410, gene-QOZ80_2AG0114160, gene-QOZ80_3BG0269440, gene-QOZ80_4AG0301510, gene-QOZ80_5AG0391590, gene-QOZ80_5AG0396920, gene-QOZ80_5BG0445450, gene-QOZ80_5BG0445460, gene-QOZ80_7AG0552230, gene-QOZ80_7BG0583230, gene-QOZ80_7BG0583240, gene-QOZ80_7BG0583260, gene-QOZ80_7BG0584230, gene-QOZ80_7BG0588680, gene-QOZ80_8AG0624410, gene-QOZ80_8AG0631400, gene-QOZ80_8AG0631410, gene-QOZ80_9AG0678340, gene-QOZ80_9AG0678350, gene-QOZ80_9AG0684150
Poaceae	Hordeum vulgare	10	HORVU.MOREX.r3.1HG0094070.1, HORVU.MOREX.r3.1HG0094080.1 ... HORVU.MOREX.r3.1HG0094090.1, HORVU.MOREX.r3.2HG0216800.1, HORVU.MOREX.r3.2HG0216840.1.CDS1, HORVU.MOREX.r3.2HG0216880.1, HORVU.MOREX.r3.5HG0420380.1, HORVU.MOREX.r3.6HG0630800.1, HORVU.MOREX.r3.6HG0630920.1, HORVU.MOREX.r3.6HG0633870.1
Poaceae	Lolium multiflorum	16	gene-QYE76_006631, gene-QYE76_015091, gene-QYE76_015099 ... gene-QYE76_015100, gene-QYE76_015101, gene-QYE76_015102, gene-QYE76_015103, gene-QYE76_026485, gene-QYE76_057808, gene-QYE76_058082, gene-QYE76_062972, gene-QYE76_063664, gene-QYE76_071388, gene-QYE76_071389, gene-QYE76_071390, gene-QYE76_071391
Poaceae	Oryza coarctata	7	Oco04G014780, Oco12G013910, Oco15G005230, Oco18G001980 ... Oco18G001990, Oco21G003130, Oco21G003170
Poaceae	Oryza sativa	11	LOC_Os02g38386.1, LOC_Os02g38392.1, LOC_Os05g23255.1 ... LOC_Os08g16450.1, LOC_Os08g16460.1, LOC_Os11g10550.1, LOC_Os11g10570.1, LOC_Os11g10610.1, LOC_Os11g10620.1, LOC_Os11g10760.1, LOC_Os11g10770.1
Poaceae	Paspalum vaginatum	16	gene-BS78_03G310900, gene-BS78_04G184800, gene-BS78_K184500 ... gene-BS78_05G016000, gene-BS78_05G065500, gene-BS78_05G139700, gene-BS78_05G139900, gene-BS78_05G186200, gene-BS78_05G223900, gene-BS78_05G224000, gene-BS78_05G224200, gene-BS78_07G066000, gene-BS78_08G046200, gene-BS78_K184700, gene-BS78_K259900, gene-BS78_K260000
Poaceae	Puccinellia tenuiflora	16	Pt_Chr0500612, Pt_Chr0500614, Pt_Chr0500615, Pt_Chr0500616 ... Pt_Chr0500833, Pt_Chr0505841, Pt_Chr0505843, Pt_Chr0505844, Pt_Chr0505846, Pt_Chr0505850, Pt_Chr0505853, Pt_Chr0505855, Pt_Chr0505856, Pt_Chr0601196, Pt_Chr0603888, Pt_Chr0704763
Poaceae	Sporobolus alterniflorus	20	Chr03G001180, Chr04G014910, Chr04G014920, Chr04G023030 ... Chr08G001250, Chr08G003960, Chr15G009980, Chr15G009990, Chr17G005490, Chr17G010630, Chr19G018750, Chr20G004080, Chr24G002570, Chr25G015980, Chr25G016940, Chr25G016950, Chr25G016960, Chr25G016980, Chr30G015830, Chr31G003490
Poaceae	Thinopyrum elongatum	18	Tel1E01G111200, Tel1E01G111400, Tel1E01G732500 ... Tel2E01G775600, Tel3E01G887900, Tel4E01G619400, Tel5E01G016200, Tel5E01G770900, Tel5E01G771000, Tel6E01G110200, Tel6E01G729100, Tel6E01G729200, Tel6E01G729500, Tel6E01G730600, Tel6E01G731100, Tel7E01G145700, Tel7E01G171800, Tel7E01G171900
Poaceae	Triticum dicoccoides	38	gene_TRIDC1AG063640, gene_TRIDC1AG063650 ... gene_TRIDC1AG063700, gene_TRIDC1AG063710, gene_TRIDC1BG065740, gene_TRIDC1BG065750, gene_TRIDC1BG065760, gene_TRIDC1BG072890, gene_TRIDC1BG072910, gene_TRIDC1BG072940, gene_TRIDC2AG076590, gene_TRIDC2AG082340, gene_TRIDC2AG082360, gene_TRIDC2BG090420, gene_TRIDC2BG090430, gene_TRIDC3BG085760, gene_TRIDC4AG003670, gene_TRIDC4AG003680, gene_TRIDC4AG062210, gene_TRIDC4BG062450, gene_TRIDC4BG062460, gene_TRIDC4BG062480, gene_TRIDC5AG001050, gene_TRIDC5AG010590, gene_TRIDC5AG045970, gene_TRIDC5BG001030, gene_TRIDC5BG001080, gene_TRIDC5BG001090, gene_TRIDC5BG001140, gene_TRIDC5BG009710, gene_TRIDC5BG012370, gene_TRIDC5BG074650, gene_TRIDC6AG058910, gene_TRIDC6BG016590, gene_TRIDC6BG069670, gene_TRIDC6BG069710, gene_TRIDC7AG007600, gene_TRIDC7AG008660
Poaceae	Triticum aestivum	67	TraesCS1A02G433600.1, TraesCS1A02G434000.1 ... TraesCS1B02G416200.1, TraesCS1B02G442200.1, TraesCS1B02G469500.1, TraesCS1B02G469700.1, TraesCS1B02G470000.1, TraesCS1B02G470100.1, TraesCS1B02G470300.1, TraesCS1B02G470400.1.cds1, TraesCS1B02G470500.1, TraesCS1B02G470600.1, TraesCS1D02G419600.1, TraesCS1D02G443300.1, TraesCS1D02G443400.1, TraesCS1D02G443551.1.cds1, TraesCS2B02G161100.1, TraesCS2B02G624900.2, TraesCS2D02G573600.1, TraesCS2D02G573800.1, TraesCS2D02G573900.1, TraesCS3B02G593900.3, TraesCS3D02G531700.1, TraesCS4A02G026300.1, TraesCS4A02G380900.1.cds1, TraesCS4A02G389400.1.cds1, TraesCS4B02G382600.1, TraesCS4D02G103400.1, TraesCS5A02G007200.1.cds1, TraesCS5B02G005700.1, TraesCS5B02G058900.1, TraesCS5B02G059000.1, TraesCS5B02G499300.1.cds1, TraesCS5B02G499400.1.cds1, TraesCS5B02G499500.1, TraesCS5D02G005300.1, TraesCS5D02G005400.1, TraesCS5D02G005416.1.cds1, TraesCS5D02G005600.1, TraesCS5D02G029000.1, TraesCS5D02G499200.1, TraesCS5D02G499300.1, TraesCS5D02G499400.1, TraesCS5D02G499500.1.cds1, TraesCS5D02G499600.1.cds1, TraesCS6A02G400900.1, TraesCS6A02G401000.1, TraesCS6B02G117100.2, TraesCS6B02G440900.1, TraesCS6B02G441200.1, TraesCS6B02G442100.1, TraesCS6B02G442200.1, TraesCS6B02G443000.1, TraesCS6B02G443300.1, TraesCS6D02G384900.1, TraesCS7A02G069600.1, TraesCS7A02G069800.1, TraesCS7D02G065100.1, TraesCS7D02G065200.1, TraesCS7D02G065500.1, TraesCSU02G113800.1, TraesCSU02G132000.1, TraesCSU02G141500.1, TraesCSU02G153000.1, TraesCSU02G153200.1, TraesCSU02G160400.1, TraesCSU02G201600.1
Poaceae	Zea mays	1	Zm00001eb116510_P001
Poaceae	Zoysia japonica	8	nbis-gene-23321, nbis-gene-3245, nbis-gene-32534 ... nbis-gene-37568, nbis-gene-48962, nbis-gene-50430, nbis-gene-54870, nbis-gene-55392
Poaceae	Zoysia macrostachya	6	Zma_g19194, Zma_g19315, Zma_g20769, Zma_g20770, Zma_g5905 ... Zma_g7335
Portulacaceae	Portulaca oleracea	2	evm.TU.LG04.2254, evm.TU.LG17.598
Posidoniaceae	Posidonia oceanica	1	gene.Posoc04g21290
Rhizophoraceae	Carallia pectinifolia	2	nbisL1-mrna-27940, nbisL1-mrna-28166
Rhizophoraceae	Ceriops tagal	2	nbisL1-mrna-10305, nbisL1-mrna-2664
Rhizophoraceae	Kandelia candel	1	add.evm.TU.utg000023l.130
Rhizophoraceae	Kandelia obovata	3	Maker00008233, Maker00010114, Maker00019105
Rhizophoraceae	Rhizophora mangle	4	nbisL1-mrna-21450, nbisL1-mrna-21453, nbisL1-mrna-21719 ... nbisL1-mrna-22196
Salicaceae	Populus euphratica	9	populus_peu13050, populus_peu13051, populus_peu13065 ... populus_peu13084, populus_peu13085, populus_peu23925, populus_peu24698, populus_peu24712, populus_peu27828
Tamaricaceae	Reaumuria soongarica	4	MSTRG.13832_chr08_+, MSTRG.13848_chr08_-, STRG.24360_chr08_- ... STRG.8738_chr03_+