halophFGD

Basic Information

Locus ID: gene-BS78_05G222400

Species & Taxonomic ID: Paspalum vaginatum & 158149

Genome Assembly: GCA_026573395.1

Description: belongs to the protein kinase superfamily

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr5	48469957	48479212	-	gene-BS78_05G222400

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.74	35,988.02 Da	53.65	80.81	-0.55

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF00069	Protein kinase domain	13	251	1.6E-33	IPR000719
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	12	253	7.69E-53	IPR011009
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	3	289	2.3E-56	-
SMART	SM00220	serkin_6	3	257	3.0E-9	IPR000719
ProSiteProfiles	PS50011	Protein kinase domain profile.	1	257	28.640444	IPR000719
ProSitePatterns	PS00108	Serine/Threonine protein kinases active-site signature.	107	119	-	IPR008271

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation)

Molecular Function:

KEGG Pathway

KO Term:

K04733 (interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1])

Pathway:

ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) map04621 (NOD-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)

Best hit

Source	Best Hit ID	Description
TAIR	AT1G11350.1	S-domain-1 13.
RefSeq	XP_037471210.1	uncharacterized protein LOC119345089 [Triticum dicoccoides]
Swiss-Prot	Q9LPZ9	G-type lectin S-receptor-like serine/threonine-protein kinase SD1-13 OS=Arabidopsis thaliana OX=3702 GN=SD113 PE=1 SV=2
TrEMBL	A0A8T0T8T7	Protein kinase domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_4NG211996 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Echinochloa crus-galli	2	AH06.2071, CH06.2106
Poaceae	Paspalum vaginatum	2	gene-BS78_05G222400, gene-BS78_K043500