Basic Information
Locus ID:
gene-BS78_05G205900
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Jacalin-like lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 45946129 | 45957255 | + | gene-BS78_05G205900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.71 | 90,038.99 Da | 38.29 | 72.95 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09612 | Jacalin | 678 | 816 | 1.3826E-28 | IPR033734 |
| CDD | cd09612 | Jacalin | 330 | 465 | 1.66771E-40 | IPR033734 |
| CDD | cd09612 | Jacalin | 496 | 643 | 2.52242E-28 | IPR033734 |
| Pfam | PF01419 | Jacalin-like lectin domain | 342 | 467 | 7.2E-21 | IPR001229 |
| Pfam | PF01419 | Jacalin-like lectin domain | 505 | 645 | 1.1E-15 | IPR001229 |
| Pfam | PF00069 | Protein kinase domain | 19 | 297 | 5.5E-47 | IPR000719 |
| Pfam | PF01419 | Jacalin-like lectin domain | 694 | 815 | 1.9E-19 | IPR001229 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 317 | 467 | 9.68E-36 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 663 | 815 | 3.92E-37 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 484 | 646 | 1.11E-32 | IPR036404 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 7 | 299 | 2.73E-65 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 110 | 318 | 4.8E-49 | - |
| Gene3D | G3DSA:2.100.10.30 | - | 319 | 467 | 7.0E-40 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 473 | 644 | 2.8E-34 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 659 | 822 | 2.1E-40 | IPR036404 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 5 | 98 | 4.9E-21 | - |
| SMART | SM00915 | Jacalin_2 | 674 | 817 | 2.8E-11 | IPR001229 |
| SMART | SM00220 | serkin_6 | 18 | 305 | 3.9E-29 | IPR000719 |
| SMART | SM00915 | Jacalin_2 | 502 | 646 | 6.9E-4 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 329 | 467 | 3.9E-6 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 317 | 467 | 27.582167 | IPR001229 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 18 | 305 | 35.961857 | IPR000719 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 661 | 817 | 28.83898 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 485 | 646 | 24.62772 | IPR001229 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 24 | 47 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 153 | 165 | - | IPR008271 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23240.2 | - | 0 |
| RefSeq | XP_015636615.1 | mannose/glucose-specific lectin isoform X1 [Oryza sativa Japonica Group] | 0 |
| Q9LDS6 | Putative cysteine-rich receptor-like protein kinase 32 OS=Arabidopsis thaliana OX=3702 GN=CRK32 PE=3 SV=1 | 0 | |
| TrEMBL | A0A0E0DD21 | Protein kinase domain-containing protein OS=Oryza meridionalis OX=40149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology