Basic Information
Locus ID:
gene-BS78_05G200200
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 45192443 | 45201761 | - | gene-BS78_05G200200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.91 | 103,194.52 Da | 41.32 | 96.26 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 617 | 883 | 2.86137E-93 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 613 | 880 | 8.6E-47 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 31 | 69 | 3.4E-7 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 596 | 893 | 1.25E-77 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 45 | 391 | 1.43E-47 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 687 | 899 | 8.4E-58 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 582 | 686 | 3.1E-35 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 30 | 198 | 6.3E-40 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 265 | 401 | 4.0E-17 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 199 | 264 | 2.7E-10 | IPR032675 |
| SMART | SM00220 | serkin_6 | 611 | 883 | 1.1E-38 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 611 | 883 | 38.265697 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 617 | 639 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 731 | 743 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G06840.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_012701538.1 | probable LRR receptor-like serine/threonine-protein kinase At1g06840 isoform X1 [Setaria italica] | 0 |
| C0LGD7 | Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana OX=3702 GN=At1g06840 PE=1 SV=2 | 0 | |
| TrEMBL | K3XE91 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 GN=101766119 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology