Basic Information
Locus ID:
gene-BS78_05G199900
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 45161344 | 45162842 | - | gene-BS78_05G199900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.39 | 49,293.49 Da | 50.00 | 94.24 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF52047 | RNI-like | 185 | 406 | 1.02E-13 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 25 | 69 | 1.44E-11 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 26 | 80 | 4.6E-6 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 198 | 442 | 1.2E-12 | IPR032675 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 26 | 76 | 10.212818 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 20 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G49040.1 | F-box/RNI-like superfamily protein. | 0 |
| RefSeq | XP_025826646.1 | MEIOTIC F-BOX protein MOF-like [Panicum hallii] | 0 |
| Q7X7A4 | MEIOTIC F-BOX protein MOF OS=Oryza sativa subsp. japonica OX=39947 GN=MOF PE=1 SV=2 | 0 | |
| TrEMBL | A0A1E5UVA4 | F-box domain-containing protein OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0022197 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology