Basic Information
Locus ID:
gene-BS78_05G199800
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 45156501 | 45157976 | - | gene-BS78_05G199800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.78 | 48,937.98 Da | 59.68 | 80.20 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 30 | 67 | 6.6E-4 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 26 | 70 | 2.88E-10 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 183 | 395 | 2.43E-14 | - |
| Gene3D | G3DSA:1.20.1280.50 | - | 27 | 80 | 2.7E-5 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 170 | 407 | 4.5E-12 | IPR032675 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 397 | 416 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 85 | 106 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 26 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_025826646.1 | MEIOTIC F-BOX protein MOF-like [Panicum hallii] | 0 |
| Q7X7A4 | MEIOTIC F-BOX protein MOF OS=Oryza sativa subsp. japonica OX=39947 GN=MOF PE=1 SV=2 | 0 | |
| TrEMBL | A0A811QC63 | F-box domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS36852 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology