Basic Information
Locus ID:
gene-BS78_05G199700
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 45151963 | 45154343 | - | gene-BS78_05G199700 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.19 | 41,228.08 Da | 56.78 | 85.86 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 87 | 125 | 5.0E-6 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 83 | 135 | 2.49E-12 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 254 | 330 | 3.45E-5 | - |
| Gene3D | G3DSA:1.20.1280.50 | - | 83 | 139 | 2.4E-7 | - |
| ProSiteProfiles | PS50181 | F-box domain profile. | 84 | 134 | 8.623154 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 140 | 163 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 140 | 186 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G18770.2 | - | 0 |
| RefSeq | XP_022685083.1 | putative F-box/FBD/LRR-repeat protein At5g56810 [Setaria italica] | 0 |
| Q7X7A4 | MEIOTIC F-BOX protein MOF OS=Oryza sativa subsp. japonica OX=39947 GN=MOF PE=1 SV=2 | 0 | |
| TrEMBL | A0A4U6TGZ3 | F-box domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_8G190400v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology