Basic Information
Locus ID:
gene-BS78_05G182000
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Wall-associated receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 42484685 | 42502377 | - | gene-BS78_05G182000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.02 | 83,103.82 Da | 43.52 | 78.14 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 356 | 390 | 1.78583E-6 | - |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 47 | 94 | 3.4E-9 | IPR025287 |
| Pfam | PF07645 | Calcium-binding EGF domain | 356 | 398 | 2.6E-7 | IPR001881 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 465 | 726 | 5.5E-43 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 441 | 730 | 1.62E-66 | IPR011009 |
| SUPERFAMILY | SSF57196 | EGF/Laminin | 353 | 399 | 2.24E-5 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 311 | 399 | 4.4E-10 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 538 | 746 | 3.9E-47 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 446 | 537 | 3.6E-25 | - |
| SMART | SM00181 | egf_5 | 311 | 355 | 16.0 | IPR000742 |
| SMART | SM00181 | egf_5 | 359 | 399 | 3.1 | IPR000742 |
| SMART | SM00220 | serkin_6 | 462 | 728 | 2.8E-17 | IPR000719 |
| SMART | SM00179 | egfca_6 | 356 | 399 | 1.7E-5 | IPR001881 |
| ProSiteProfiles | PS50026 | EGF-like domain profile. | 356 | 395 | 10.945397 | IPR000742 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 462 | 727 | 32.569698 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 581 | 593 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 468 | 491 | - | IPR017441 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 356 | 383 | - | IPR018097 |
| ProSitePatterns | PS00010 | Aspartic acid and asparagine hydroxylation site. | 374 | 385 | - | IPR000152 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21270.1 | wall-associated kinase 2. cytoplasmic serine/threonine protein kinase induced by salicylic acid. mutant plants exhibit a loss of cell expansion and dependence on sugars and salts for seedling growth, affecting the expression and activity of vacuolar invertase. | 0 |
| RefSeq | XP_022685282.1 | wall-associated receptor kinase 2 [Setaria italica] | 0 |
| Q9LMP1 | Wall-associated receptor kinase 2 OS=Arabidopsis thaliana OX=3702 GN=WAK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A368SAV9 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 GN=SETIT_8G185300v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology