Basic Information
Locus ID:
gene-BS78_05G174800
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
CHASE domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 41350967 | 41355650 | + | gene-BS78_05G174800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.24 | 64,535.12 Da | 37.23 | 92.44 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 255 | 520 | 3.3E-42 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 239 | 534 | 1.01E-63 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 330 | 530 | 1.7E-46 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 220 | 329 | 3.8E-24 | - |
| SMART | SM00220 | serkin_6 | 255 | 523 | 3.4E-24 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 255 | 533 | 33.559078 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 373 | 385 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 261 | 284 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 158 | 181 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G10530.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_021316803.1 | probable kinase CHARK [Sorghum bicolor] | 0 |
| Q2QRN7 | Probable kinase CHARK OS=Oryza sativa subsp. japonica OX=39947 GN=CHARK PE=2 SV=1 | 0 | |
| TrEMBL | A0A1Z5RHJ9 | Protein kinase domain-containing protein OS=Sorghum bicolor OX=4558 GN=SORBI_3005G075400 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
No orthogroup found for gene-BS78_05G174800.