Basic Information
Locus ID:
gene-BS78_05G171300
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Targeting protein for Xklp2 (TPX2)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 40911275 | 40915052 | + | gene-BS78_05G171300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.74 | 46,360.06 Da | 51.12 | 57.06 | -0.77 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF06886 | Targeting protein for Xklp2 (TPX2) domain | 230 | 313 | 2.0E-23 | IPR027329 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 233 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 24 | 43 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 204 | 221 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 324 | 349 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 285 | 437 | - | - |
| Coils | Coil | Coil | 245 | 275 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G35880.1 | TPX2 (targeting protein for Xklp2) protein family. | 0 |
| RefSeq | XP_034568387.1 | protein WVD2-like 4 isoform X2 [Setaria viridis] | 0 |
| Q9SJ62 | Protein WVD2-like 4 OS=Arabidopsis thaliana OX=3702 GN=WDL4 PE=1 SV=2 | 0 | |
| TrEMBL | A0A1E5WGD9 | Protein WVD2-like 4 OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0002520 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology