Basic Information
Locus ID:
gene-BS78_05G170000
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 40760461 | 40772761 | + | gene-BS78_05G170000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.34 | 70,240.84 Da | 39.20 | 90.61 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 385 | 504 | 3.7E-16 | IPR001245 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 37 | 299 | 1.0E-45 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 338 | 611 | 4.92E-34 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 14 | 299 | 9.17E-69 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 348 | 437 | 2.3E-13 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 440 | 506 | 1.4E-13 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 106 | 323 | 4.0E-51 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 5 | 105 | 1.7E-23 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 511 | 620 | 3.7E-12 | - |
| SMART | SM00220 | serkin_6 | 33 | 303 | 1.8E-30 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 33 | 303 | 35.566105 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 343 | 614 | 11.382831 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 149 | 161 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51550.1 | Malectin/receptor-like protein kinase family protein. Encodes a synergid-expressed, plasma-membrane localized receptor-like kinase that accumulates asymetrically in the synergid membrnane at the filiform apparatus and mediates male-female gametophyte interactions during pollen tube reception. | 0 |
| RefSeq | XP_034607132.1 | receptor-like protein kinase FERONIA [Setaria viridis] | 0 |
| Q9SCZ4 | Receptor-like protein kinase FERONIA OS=Arabidopsis thaliana OX=3702 GN=FER PE=1 SV=1 | 0 | |
| TrEMBL | A0A4U6TU61 | Protein kinase domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_8G164500v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Casuarinaceae | Casuarina glauca | 1 | Cgl08G0409 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_3AG0250330, gene-QOZ80_3AG0250370 |
| Poaceae | Hordeum vulgare | 3 | HORVU.MOREX.r3.5HG0520990.1.CDS1 ... |
| Poaceae | Paspalum vaginatum | 3 | gene-BS78_01G329200, gene-BS78_01G329600 ... |
| Poaceae | Thinopyrum elongatum | 1 | Tel5E01G709800 |
| Poaceae | Triticum dicoccoides | 4 | gene_TRIDC5AG064500, gene_TRIDC5AG064520 ... |
| Poaceae | Triticum aestivum | 8 | TraesCS2B02G538400.1.cds1, TraesCS5A02G449700.1.cds1 ... |