halophFGD

Basic Information

Locus ID: gene-BS78_05G169300

Species & Taxonomic ID: Paspalum vaginatum & 158149

Genome Assembly: GCA_026573395.1

Description:

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr5	40714795	40715534	-	gene-BS78_05G169300

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
9.24	18,688.24 Da	57.95	83.33	-0.29

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF00646	F-box domain	39	75	1.1E-6	IPR001810
SUPERFAMILY	SSF81383	F-box domain	35	79	2.09E-13	IPR036047
Gene3D	G3DSA:1.20.1280.50	-	36	92	7.2E-9	-
ProSiteProfiles	PS50181	F-box domain profile.	36	72	9.417986	IPR001810

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

Best hit

Source	Best Hit ID	Description
TAIR	AT5G02910.2	F-box/RNI-like superfamily protein.
RefSeq	XP_021317450.1	F-box/FBD/LRR-repeat protein At5g22700 [Sorghum bicolor]
Swiss-Prot	Q9LYZ4	F-box/LRR-repeat protein At5g02910 OS=Arabidopsis thaliana OX=3702 GN=At5g02910 PE=2 SV=1
TrEMBL	A0A811Q3A2	F-box domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS37161 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Amaranthaceae	Chenopodium album	1	gene:ENSEOMG00000036842
Anacardiaceae	Pistacia vera	4	pistato.v30022130, pistato.v30121010, pistato.v30121030 ... pistato.v30161500
Arecaceae	Cocos nucifera	2	COCNU_15G004180, scaffold003335G000030
Arecaceae	Phoenix dactylifera	1	gene-LOC103717572
Asteraceae	Flaveria trinervia	6	Ftri13G17722, Ftri17G03153, Ftri17G06149, Ftri17G19173 ... Ftri3G25033, Ftri7G11593
Brassicaceae	Arabidopsis thaliana	1	AT2G39415.1
Brassicaceae	Eutrema salsugineum	2	Thhalv10010897m.g.v1.0, Thhalv10029455m.g.v1.0
Brassicaceae	Brassica nigra	1	BniB06g004630.2N
Nitrariaceae	Nitraria sibirica	2	evm.TU.LG04.2277, evm.TU.LG04.2280
Plantaginaceae	Plantago ovata	3	Pov_00002227, Pov_00013091, Pov_00014214
Poaceae	Echinochloa crus-galli	66	AH01.2698, AH02.2036, AH04.1403, AH04.1598, AH04.1630 ... AH04.394, AH04.666, AH04.668, AH04.894, AH04.972, AH05.2019, AH05.4136, BH01.3034, BH02.2081, BH04.1082, BH04.1383, BH04.1648, BH04.1739, BH04.1742, BH04.404, BH04.683, BH04.699, BH04.704, BH04.707, BH04.735, BH04.741, BH04.913, BH05.1588, BH05.2156, BH05.3450, BH05.4220, BH07.1852, BH07.917, BH08.317, BH08.319, BH08.664, BH09.2296, CH01.2583, CH01.3243, CH01.3245, CH02.2132, CH04.1574, CH04.1596, CH04.1834, CH04.1873, CH04.1875, CH04.2257, CH04.421, CH04.708, CH04.716, CH04.734, CH04.794, CH04.965, CH04.966, CH04.970, CH04.972, CH04.973, CH04.981, CH05.2228, CH05.2986, CH05.3580, CH05.4454, CH07.1711, CH08.395, CH08.744, CH09.2437
Poaceae	Eleusine coracana subsp. coracana	45	gene-QOZ80_1AG0021050, gene-QOZ80_1AG0035270 ... gene-QOZ80_1BG0070840, gene-QOZ80_1BG0070850, gene-QOZ80_1BG0085330, gene-QOZ80_2AG0116370, gene-QOZ80_2AG0119160, gene-QOZ80_2AG0144940, gene-QOZ80_2BG0200440, gene-QOZ80_3AG0246820, gene-QOZ80_3AG0247150, gene-QOZ80_3BG0281090, gene-QOZ80_5AG0364840, gene-QOZ80_6AG0512510, gene-QOZ80_7BG0591920, gene-QOZ80_7BG0591940, gene-QOZ80_7BG0591960, gene-QOZ80_7BG0591990, gene-QOZ80_8AG0617440, gene-QOZ80_8BG0645080, gene-QOZ80_9AG0676220, gene-QOZ80_9AG0676550, gene-QOZ80_9AG0676610, gene-QOZ80_9AG0676630, gene-QOZ80_9AG0676790, gene-QOZ80_9AG0676800, gene-QOZ80_9AG0676840, gene-QOZ80_9AG0676860, gene-QOZ80_9AG0676990, gene-QOZ80_9AG0677030, gene-QOZ80_9AG0677060, gene-QOZ80_9AG0679040, gene-QOZ80_9BG0700170, gene-QOZ80_9BG0700290, gene-QOZ80_9BG0700310, gene-QOZ80_9BG0700380, gene-QOZ80_9BG0700390, gene-QOZ80_9BG0700510, gene-QOZ80_9BG0700540, gene-QOZ80_9BG0700610, gene-QOZ80_9BG0700630, gene-QOZ80_9BG0700640, gene-QOZ80_9BG0700770, gene-QOZ80_9BG0702790, gene-QOZ80_9BG0711530
Poaceae	Hordeum vulgare	18	HORVU.MOREX.r3.1HG0053140.1.CDS1 ... HORVU.MOREX.r3.2HG0189660.1, HORVU.MOREX.r3.3HG0221920.1, HORVU.MOREX.r3.3HG0221930.1, HORVU.MOREX.r3.4HG0346320.1, HORVU.MOREX.r3.4HG0346390.1, HORVU.MOREX.r3.4HG0346450.1.CDS1, HORVU.MOREX.r3.4HG0346460.1, HORVU.MOREX.r3.4HG0400330.1, HORVU.MOREX.r3.4HG0400340.1, HORVU.MOREX.r3.5HG0502620.1, HORVU.MOREX.r3.6HG0546050.1, HORVU.MOREX.r3.6HG0549630.1, HORVU.MOREX.r3.6HG0549660.1, HORVU.MOREX.r3.6HG0549750.1, HORVU.MOREX.r3.6HG0558120.1, HORVU.MOREX.r3.6HG0630490.1, HORVU.MOREX.r3.7HG0709480.1
Poaceae	Lolium multiflorum	70	gene-QYE76_001262, gene-QYE76_002128, gene-QYE76_007188 ... gene-QYE76_007189, gene-QYE76_007380, gene-QYE76_007836, gene-QYE76_007837, gene-QYE76_008136, gene-QYE76_009123, gene-QYE76_009284, gene-QYE76_012871, gene-QYE76_013800, gene-QYE76_017355, gene-QYE76_019601, gene-QYE76_019602, gene-QYE76_019607, gene-QYE76_019771, gene-QYE76_019772, gene-QYE76_019774, gene-QYE76_019775, gene-QYE76_019776, gene-QYE76_019778, gene-QYE76_019779, gene-QYE76_026470, gene-QYE76_026481, gene-QYE76_026486, gene-QYE76_027265, gene-QYE76_032476, gene-QYE76_032478, gene-QYE76_033741, gene-QYE76_033750, gene-QYE76_034089, gene-QYE76_034411, gene-QYE76_037887, gene-QYE76_046203, gene-QYE76_046204, gene-QYE76_046205, gene-QYE76_046206, gene-QYE76_046208, gene-QYE76_046211, gene-QYE76_046213, gene-QYE76_049790, gene-QYE76_049791, gene-QYE76_060606, gene-QYE76_060783, gene-QYE76_061906, gene-QYE76_061907, gene-QYE76_061908, gene-QYE76_064349, gene-QYE76_064351, gene-QYE76_064352, gene-QYE76_064353, gene-QYE76_064355, gene-QYE76_064358, gene-QYE76_064359, gene-QYE76_064360, gene-QYE76_064363, gene-QYE76_064418, gene-QYE76_064431, gene-QYE76_064436, gene-QYE76_064440, gene-QYE76_064447, gene-QYE76_064454, gene-QYE76_064455, gene-QYE76_064458, gene-QYE76_064460, gene-QYE76_064602, gene-QYE76_068964, gene-QYE76_070615, gene-QYE76_070992
Poaceae	Oryza coarctata	28	Oco02G026960, Oco04G004510, Oco04G026240, Oco11G011050 ... Oco11G011070, Oco12G008690, Oco12G011170, Oco15G001970, Oco16G002030, Oco17G011090, Oco19G000440, Oco19G000450, Oco19G000460, Oco19G000470, Oco20G000500, Oco20G000510, Oco20G000520, Oco21G003040, Oco21G003050, Oco21G003060, Oco22G003680, Oco22G003690, Oco22G003700, Oco22G003710, Oco22G003720, Oco22G003840, Oco22G003860, Oco22G003870
Poaceae	Oryza sativa	43	LOC_Os06g29740.1, LOC_Os06g36220.1, LOC_Os08g05460.1 ... LOC_Os09g37570.1, LOC_Os10g03620.1, LOC_Os10g03660.1, LOC_Os10g03690.1, LOC_Os10g03730.1, LOC_Os10g03740.2, LOC_Os10g03750.1, LOC_Os10g03760.1, LOC_Os10g03780.1, LOC_Os10g03850.1, LOC_Os10g03900.1, LOC_Os10g03910.1, LOC_Os10g03930.1, LOC_Os11g09360.1, LOC_Os11g09460.1, LOC_Os11g09474.1, LOC_Os11g09478.1, LOC_Os11g09510.1, LOC_Os11g09580.1, LOC_Os11g09590.1, LOC_Os11g09600.1, LOC_Os11g09630.1, LOC_Os11g09640.1, LOC_Os11g09670.1, LOC_Os11g09680.1, LOC_Os11g09690.1, LOC_Os11g09960.1, LOC_Os11g09970.1, LOC_Os11g10160.1, LOC_Os11g10180.1, LOC_Os11g10200.1, LOC_Os11g10240.1, LOC_Os11g10250.1, LOC_Os11g10300.1, LOC_Os11g10330.1, LOC_Os11g10340.1, LOC_Os11g10370.1, LOC_Os11g10400.2, LOC_Os11g12480.1, LOC_Os11g15620.1
Poaceae	Paspalum vaginatum	44	gene-BS78_01G253200, gene-BS78_01G263800, gene-BS78_K039300 ... gene-BS78_03G180800, gene-BS78_03G218800, gene-BS78_05G054300, gene-BS78_05G055200, gene-BS78_05G088900, gene-BS78_05G092700, gene-BS78_05G092900, gene-BS78_05G093700, gene-BS78_05G093800, gene-BS78_05G100800, gene-BS78_05G104600, gene-BS78_05G104800, gene-BS78_05G105200, gene-BS78_05G105800, gene-BS78_05G106100, gene-BS78_05G106200, gene-BS78_05G106300, gene-BS78_05G106400, gene-BS78_05G106700, gene-BS78_05G106800, gene-BS78_05G107000, gene-BS78_05G107100, gene-BS78_05G107400, gene-BS78_05G108600, gene-BS78_05G109700, gene-BS78_05G109900, gene-BS78_05G110000, gene-BS78_05G148500, gene-BS78_05G167100, gene-BS78_05G167700, gene-BS78_05G169300, gene-BS78_05G169500, gene-BS78_K090500, gene-BS78_K172700, gene-BS78_K172900, gene-BS78_K173000, gene-BS78_K173100, gene-BS78_K191400, gene-BS78_K191500, gene-BS78_K271200, gene-BS78_K271400
Poaceae	Puccinellia tenuiflora	11	Pt_Chr0103934, Pt_Chr0206160, Pt_Chr0206162, Pt_Chr0206166 ... Pt_Chr0206170, Pt_Chr0206903, Pt_Chr0306984, Pt_Chr0500139, Pt_Chr0503674, Pt_Chr0701150, Pt_Chr0705476
Poaceae	Sporobolus alterniflorus	33	Chr01G013930, Chr01G013940, Chr02G008260, Chr02G017630 ... Chr04G024000, Chr05G016400, Chr07G019540, Chr07G019560, Chr07G019570, Chr07G019590, Chr07G019630, Chr07G019650, Chr07G019660, Chr07G019680, Chr07G019710, Chr07G019760, Chr07G020670, Chr12G022910, Chr13G004880, Chr13G004890, Chr13G017960, Chr13G017970, Chr14G009440, Chr16G005830, Chr16G005840, Chr16G005870, Chr16G010940, Chr17G005220, Chr29G011590, Chr31G002340, Chr31G002390, Chr31G002400, Chr31G002420
Poaceae	Thinopyrum elongatum	36	Tel2E01G705900, Tel2E01G774600, Tel3E01G197800 ... Tel3E01G197900, Tel3E01G826000, Tel4E01G161800, Tel4E01G162900, Tel4E01G163500, Tel4E01G163900, Tel4E01G164000, Tel4E01G451400, Tel4E01G457600, Tel5E01G553100, Tel6E01G116700, Tel6E01G118000, Tel6E01G164700, Tel6E01G165500, Tel6E01G165600, Tel6E01G165700, Tel6E01G249500, Tel6E01G658300, Tel6E01G658400, Tel6E01G658500, Tel6E01G660100, Tel6E01G660300, Tel6E01G660800, Tel6E01G661700, Tel6E01G662200, Tel6E01G663700, Tel6E01G719800, Tel7E01G043900, Tel7E01G346300, Tel7E01G523800, Tel7E01G523900, Tel7E01G571300, Tel7E01G571400
Poaceae	Triticum dicoccoides	32	gene_TRIDC1AG029270, gene_TRIDC2BG069580 ... gene_TRIDC2BG069600, gene_TRIDC2BG069640-42090, gene_TRIDC2BG069640-92588, gene_TRIDC4AG004700, gene_TRIDC4AG004720, gene_TRIDC4AG033740, gene_TRIDC4BG015800, gene_TRIDC4BG015980, gene_TRIDC4BG015990, gene_TRIDC4BG047010, gene_TRIDC4BG047030, gene_TRIDC5AG050620, gene_TRIDC6AG008470, gene_TRIDC6AG008540, gene_TRIDC6AG008600, gene_TRIDC6AG015080, gene_TRIDC6AG055400, gene_TRIDC6BG012790, gene_TRIDC6BG012880, gene_TRIDC6BG012890, gene_TRIDC6BG012930, gene_TRIDC6BG020490, gene_TRIDC6BG064850, gene_TRIDC7AG048510, gene_TRIDC7AG071400, gene_TRIDC7BG015330, gene_TRIDC7BG032530, gene_TRIDC7BG038890, gene_TRIDC7BG066580, gene_TRIDC7BG066600
Poaceae	Triticum aestivum	121	TraesCS1A02G193100.1, TraesCS1D02G196800.1 ... TraesCS2A02G456800.1, TraesCS2A02G569100.1, TraesCS2B02G479000.3, TraesCS2B02G479100.1, TraesCS2B02G479200.2, TraesCS2B02G479300.1, TraesCS2D02G424400.1, TraesCS2D02G457100.1, TraesCS2D02G457200.1, TraesCS3A02G042200.1, TraesCS3B02G041500.1, TraesCS4A02G033700.1, TraesCS4A02G033900.1, TraesCS4A02G038900.1, TraesCS4A02G212300.1, TraesCS4A02G213000.2, TraesCS4B02G102800.1, TraesCS4B02G103500.1, TraesCS4B02G103600.1, TraesCS4B02G266900.1.cds1, TraesCS4B02G271600.1, TraesCS4B02G271700.1, TraesCS4D02G098700.1, TraesCS4D02G099400.1, TraesCS4D02G099800.1, TraesCS4D02G100100.1, TraesCS4D02G100400.1, TraesCS4D02G100500.1, TraesCS4D02G100600.1, TraesCS4D02G100700.2, TraesCS4D02G266500.1, TraesCS4D02G270700.1, TraesCS4D02G270800.1, TraesCS5A02G346900.1, TraesCS5B02G348000.1.cds1, TraesCS6A02G044500.1, TraesCS6A02G069300.1, TraesCS6A02G069600.1.cds1, TraesCS6A02G069800.1.cds1, TraesCS6A02G069900.1, TraesCS6A02G070100.1, TraesCS6A02G070300.1.cds1, TraesCS6A02G070400.1, TraesCS6A02G114700.1, TraesCS6A02G369100.1, TraesCS6A02G369200.1, TraesCS6A02G369400.1, TraesCS6A02G369600.1, TraesCS6A02G370000.1.cds1, TraesCS6A02G370200.1, TraesCS6A02G370400.1, TraesCS6A02G370700.2, TraesCS6A02G371600.1, TraesCS6A02G398900.1, TraesCS6B02G016200.1, TraesCS6B02G060000.2, TraesCS6B02G060400.1, TraesCS6B02G060500.1, TraesCS6B02G061200.1, TraesCS6B02G093600.2, TraesCS6B02G094000.1, TraesCS6B02G094100.1.cds1, TraesCS6B02G094200.1, TraesCS6B02G142100.1, TraesCS6B02G404300.1.cds1, TraesCS6B02G405000.1, TraesCS6B02G405400.1, TraesCS6B02G405500.1, TraesCS6B02G405800.1, TraesCS6B02G406500.1, TraesCS6B02G406700.1, TraesCS6B02G407200.1.cds1, TraesCS6B02G407300.1, TraesCS6B02G407900.1, TraesCS6B02G408600.1, TraesCS6B02G409000.1.cds1, TraesCS6B02G439200.1, TraesCS6D02G032500.1.cds1, TraesCS6D02G052300.1, TraesCS6D02G067100.1, TraesCS6D02G067600.1, TraesCS6D02G067700.1, TraesCS6D02G068000.1, TraesCS6D02G068100.1, TraesCS6D02G068200.1, TraesCS6D02G103200.1, TraesCS6D02G352600.3, TraesCS6D02G352700.3, TraesCS6D02G353600.1, TraesCS6D02G353900.3, TraesCS6D02G354300.1, TraesCS6D02G354400.1, TraesCS6D02G355600.1, TraesCS6D02G360300.1, TraesCS7A02G198400.1, TraesCS7A02G305400.1, TraesCS7A02G305500.1, TraesCS7A02G305600.1, TraesCS7A02G347300.1, TraesCS7A02G347400.1, TraesCS7A02G509400.1, TraesCS7A02G509800.1, TraesCS7B02G104100.1, TraesCS7B02G205800.1, TraesCS7B02G235800.1, TraesCS7B02G235900.1, TraesCS7D02G188700.1, TraesCS7D02G200100.1, TraesCS7D02G302200.1, TraesCS7D02G302300.2, TraesCS7D02G331500.2, TraesCS7D02G331600.1, TraesCS7D02G331700.1, TraesCS7D02G498200.1, TraesCS7D02G498900.1, TraesCS7D02G499000.1, TraesCSU02G155900.4, TraesCSU02G165200.1, TraesCSU02G193100.1.cds1
Poaceae	Zoysia japonica	5	nbis-gene-21913, nbis-gene-27289, nbis-gene-38254 ... nbis-gene-41581, nbis-gene-54577
Poaceae	Zoysia macrostachya	5	Zma_g15809, Zma_g17700, Zma_g18073, Zma_g18556, Zma_g18563
Posidoniaceae	Posidonia oceanica	2	gene.Posoc03g18200, gene.Posoc07g14950
Rhizophoraceae	Bruguiera sexangula	6	evm.TU.Scaffold_13_RagTag.177, evm.TU.Scaffold_13_RagTag.178 ... evm.TU.Scaffold_13_RagTag.216, evm.TU.Scaffold_14_RagTag.501, evm.TU.Scaffold_16_RagTag.444, evm.TU.Scaffold_16_RagTag.445
Rhizophoraceae	Carallia pectinifolia	5	nbisL1-mrna-17867, nbisL1-mrna-22693, nbisL1-mrna-23295 ... nbisL1-mrna-29504, nbisL1-mrna-8354
Rhizophoraceae	Ceriops tagal	1	nbisL1-mrna-10628
Rhizophoraceae	Kandelia candel	4	add.evm.TU.utg000013l.5, evm.TU.utg000007l.84 ... evm.TU.utg000009l.262, evm.TU.utg000022l.230
Rhizophoraceae	Rhizophora apiculata	6	nbisL1-mrna-18075, nbisL1-mrna-19127, nbisL1-mrna-23309 ... nbisL1-mrna-3369, nbisL1-mrna-3370, nbisL1-mrna-5969
Rhizophoraceae	Rhizophora mangle	5	nbisL1-mrna-10617, nbisL1-mrna-16905, nbisL1-mrna-6446 ... nbisL1-mrna-6447, nbisL1-mrna-6448
Salicaceae	Populus euphratica	8	populus_peu01169, populus_peu01173, populus_peu03140 ... populus_peu17732, populus_peu27896, populus_peu27916, populus_peu27917, populus_peu28005
Tamaricaceae	Tamarix chinensis	1	TC10G1701