Basic Information
Locus ID:
gene-BS78_05G131000
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 21603792 | 21607310 | - | gene-BS78_05G131000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.01 | 83,618.95 Da | 46.01 | 87.96 | 0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 462 | 694 | 2.3E-40 | IPR000719 |
| SUPERFAMILY | SSF50985 | RCC1/BLIP-II | 125 | 312 | 2.22E-5 | IPR009091 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 440 | 758 | 6.79E-67 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 437 | 548 | 1.7E-29 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 549 | 767 | 8.3E-47 | - |
| Gene3D | G3DSA:2.130.10.30 | - | 70 | 322 | 7.7E-11 | IPR009091 |
| SMART | SM00220 | serkin_6 | 461 | 733 | 4.0E-28 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 461 | 762 | 34.16684 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 467 | 489 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 596 | 608 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 776 | 795 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 781 | 795 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G47850.1 | CRINKLY4 related 4. | 0 |
| RefSeq | XP_008678113.1 | serine/threonine-protein kinase-like protein CCR4 [Zea mays] | 0 |
| Q9FIJ6 | Serine/threonine-protein kinase-like protein CCR4 OS=Arabidopsis thaliana OX=3702 GN=CCR4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3L6F6G7 | Serine/threonine-protein kinase-like protein CCR4 OS=Zea mays OX=4577 GN=CCR4_5 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology