Basic Information
Locus ID:
gene-BS78_05G125200
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 18291903 | 18296637 | - | gene-BS78_05G125200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.47 | 78,088.01 Da | 43.56 | 95.42 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 399 | 679 | 4.4E-50 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 76 | 356 | 3.2E-41 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 55 | 363 | 4.32E-70 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 382 | 684 | 4.45E-74 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 167 | 380 | 4.3E-52 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 38 | 147 | 5.1E-23 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 381 | 490 | 1.0E-22 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 491 | 685 | 2.7E-52 | - |
| SMART | SM00220 | serkin_6 | 75 | 372 | 1.1E-23 | IPR000719 |
| SMART | SM00220 | serkin_6 | 398 | 684 | 5.4E-38 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 398 | 684 | 38.505974 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 75 | 372 | 35.877052 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 404 | 426 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 533 | 545 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 81 | 104 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23270.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 19. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_021317235.1 | probable serine/threonine-protein kinase PBL23 isoform X1 [Sorghum bicolor] | 0 |
| O23082 | Cysteine-rich receptor-like protein kinase 44 OS=Arabidopsis thaliana OX=3702 GN=CRK44 PE=3 SV=2 | 0 | |
| TrEMBL | A0A1B6PRC2 | Protein kinase domain-containing protein OS=Sorghum bicolor OX=4558 GN=SORBI_3005G096400 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology