Basic Information
Locus ID:
gene-BS78_05G124200
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
histone H2A K63-linked deubiquitination
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 17787860 | 17790262 | - | gene-BS78_05G124200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.21 | 39,267.06 Da | 37.08 | 72.06 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_021308166.1 | uncharacterized protein LOC8077221 isoform X3 [Sorghum bicolor] | 0 |
| TrEMBL | C5X7N1 | MCM_N domain-containing protein OS=Sorghum bicolor OX=4558 GN=SORBI_3002G289000 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 1 | BH03.2807 |
| Poaceae | Oryza coarctata | 1 | Oco11G005130 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_05G124200 |
| Poaceae | Thinopyrum elongatum | 1 | Tel5E01G517400 |