Basic Information
Locus ID:
gene-BS78_05G117700
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
F-box domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 16208250 | 16212469 | - | gene-BS78_05G117700 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.11 | 40,552.27 Da | 44.19 | 67.62 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 27 | 58 | 1.4E-6 | IPR001810 |
| Pfam | PF01344 | Kelch motif | 179 | 225 | 1.8E-10 | IPR006652 |
| SUPERFAMILY | SSF81383 | F-box domain | 16 | 65 | 2.09E-8 | IPR036047 |
| SUPERFAMILY | SSF117281 | Kelch motif | 105 | 370 | 9.94E-45 | IPR015915 |
| Gene3D | G3DSA:2.120.10.80 | - | 54 | 301 | 1.3E-36 | IPR015915 |
| Gene3D | G3DSA:2.120.10.80 | - | 302 | 382 | 3.2E-5 | IPR015915 |
| SMART | SM00612 | kelc_smart | 191 | 240 | 3.5E-5 | IPR006652 |
| SMART | SM00612 | kelc_smart | 142 | 190 | 1.0E-4 | IPR006652 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G44130.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | XP_025827219.1 | F-box/kelch-repeat protein At2g44130-like [Panicum hallii] | 0 |
| O80582 | F-box/kelch-repeat protein At2g44130 OS=Arabidopsis thaliana OX=3702 GN=At2g44130 PE=2 SV=2 | 0 | |
| TrEMBL | A0A1E5VAS5 | F-box/kelch-repeat protein OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0016726 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology