Basic Information
Locus ID:
gene-BS78_05G085100
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
translation initiation factor activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 10110837 | 10115762 | + | gene-BS78_05G085100 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.08 | 91,034.98 Da | 35.98 | 127.39 | 0.59 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 30 | 314 | 1.0E-47 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 15 | 316 | 3.64E-71 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 124 | 321 | 5.6E-51 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 2 | 105 | 1.6E-23 | - |
| SMART | SM00220 | serkin_6 | 29 | 317 | 2.0E-34 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 29 | 328 | 38.336369 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 168 | 180 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 35 | 59 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G21410.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 29. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_052136829.1 | cysteine-rich receptor-like protein kinase 6 isoform X1 [Oryza glaberrima] | 0 |
| Q8S9L6 | Cysteine-rich receptor-like protein kinase 29 OS=Arabidopsis thaliana OX=3702 GN=CRK29 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3L6Q1Z0 | Protein kinase domain-containing protein OS=Panicum miliaceum OX=4540 GN=C2845_PM17G03520 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
No orthogroup found for gene-BS78_05G085100.