Basic Information
Locus ID:
gene-BS78_05G084900
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 10094829 | 10099047 | + | gene-BS78_05G084900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.67 | 29,024.53 Da | 44.25 | 80.69 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 26 | 244 | 9.1E-23 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 10 | 246 | 2.08E-40 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 114 | 262 | 2.0E-26 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 3 | 107 | 3.1E-21 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 24 | 262 | 24.428511 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G70740.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_039839753.1 | serine/threonine-protein kinase PBS1-like isoform X2 [Panicum virgatum] | 0 |
| Q9CAC3 | Cysteine-rich receptor-like protein kinase 43 OS=Arabidopsis thaliana OX=3702 GN=CRK43 PE=2 SV=2 | 0 | |
| TrEMBL | A0A1E5UNA8 | Putative receptor-like protein kinase OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0024630 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_05G084900, gene-BS78_09G049100 |