halophFGD

Basic Information

Locus ID: gene-BS78_05G065500

Species & Taxonomic ID: Paspalum vaginatum & 158149

Genome Assembly: GCA_026573395.1

Description: NB-ARC domain

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr5	6750833	6772923	+	gene-BS78_05G065500

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.78	204,318.41 Da	44.69	97.85	-0.16

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF00560	Leucine Rich Repeat	1046	1068	1.3	IPR001611
Pfam	PF00931	NB-ARC domain	529	768	1.0E-39	IPR002182
Pfam	PF00635	MSP (Major sperm protein) domain	360	427	4.1E-6	IPR000535
Pfam	PF00069	Protein kinase domain	66	327	9.4E-41	IPR000719
SUPERFAMILY	SSF52058	L domain-like	1121	1555	6.8E-31	-
SUPERFAMILY	SSF49354	PapD-like	330	471	6.8E-10	IPR008962
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	4	331	5.8E-63	IPR011009
SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	504	782	1.91E-54	IPR027417
SUPERFAMILY	SSF52058	L domain-like	853	1211	1.8E-43	-
SUPERFAMILY	SSF52047	RNI-like	1602	1786	8.63E-22	-
Gene3D	G3DSA:3.80.10.10	Ribonuclease Inhibitor	1110	1343	4.2E-35	IPR032675
Gene3D	G3DSA:3.80.10.10	Ribonuclease Inhibitor	1594	1706	7.9E-18	IPR032675
Gene3D	G3DSA:3.80.10.10	Ribonuclease Inhibitor	1358	1557	1.0E-9	IPR032675
Gene3D	G3DSA:3.80.10.10	Ribonuclease Inhibitor	1707	1805	1.3E-8	IPR032675
Gene3D	G3DSA:3.80.10.10	Ribonuclease Inhibitor	900	1102	3.2E-35	IPR032675
Gene3D	G3DSA:2.60.40.10	Immunoglobulins	338	469	2.4E-11	IPR013783
Gene3D	G3DSA:3.30.200.20	Phosphorylase Kinase; domain 1	1	121	2.1E-16	-
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	139	337	1.4E-45	-
Gene3D	G3DSA:1.10.10.10	-	762	863	4.1E-12	IPR036388
Gene3D	G3DSA:3.40.50.300	-	510	673	6.5E-29	IPR027417
SMART	SM00367	LRR_CC_2	1749	1776	99.0	IPR006553
SMART	SM00367	LRR_CC_2	1176	1203	61.0	IPR006553
SMART	SM00220	serkin_6	18	336	1.8E-27	IPR000719
SMART	SM00367	LRR_CC_2	1044	1074	77.0	IPR006553
SMART	SM00367	LRR_CC_2	1290	1317	610.0	IPR006553
SMART	SM00367	LRR_CC_2	1607	1635	51.0	IPR006553
ProSiteProfiles	PS50202	Major sperm protein (MSP) domain profile.	339	467	10.406605	IPR000535
ProSiteProfiles	PS50011	Protein kinase domain profile.	18	331	36.2304	IPR000719
ProSitePatterns	PS00108	Serine/Threonine protein kinases active-site signature.	182	194	-	IPR008271
PRINTS	PR00364	Disease resistance protein signature	547	562	3.1E-19	-
PRINTS	PR00364	Disease resistance protein signature	618	632	3.1E-19	-
PRINTS	PR00364	Disease resistance protein signature	1288	1304	3.1E-19	-
PRINTS	PR00364	Disease resistance protein signature	715	729	3.1E-19	-
Coils	Coil	Coil	1372	1392	-	-

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation)

Molecular Function:

GO:0004672 (protein kinase activity) GO:0005515 (protein binding) GO:0005524 (ATP binding) GO:0043531 (ADP binding)

Best hit

Source	Best Hit ID	Description
TAIR	AT4G23200.1	cysteine-rich RLK (RECEPTOR-like protein kinase) 12. Encodes a cysteine-rich receptor-like protein kinase.
RefSeq	XP_034569209.1	uncharacterized protein LOC117833724 isoform X1 [Setaria viridis]
Swiss-Prot	Q7XA42	Putative disease resistance protein RGA1 OS=Solanum bulbocastanum OX=147425 GN=RGA1 PE=2 SV=2
TrEMBL	A0A4U6TG33	Protein kinase domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_8G049200v2 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	4	jg25372, jg25931, jg5627, jg98
Aizoaceae	Mesembryanthemum crystallinum	1	gene_8179
Amaranthaceae	Atriplex hortensis	5	Ah009863, Ah009889, Ah019076, Ah036058, Ah039075
Amaranthaceae	Beta vulgaris	3	BVRB_2g039430, BVRB_2g042620, BVRB_3g055850
Amaranthaceae	Salicornia bigelovii	4	Sbi_jg18650, Sbi_jg43699, Sbi_jg48544, Sbi_jg56270
Amaranthaceae	Salicornia europaea	3	Seu_jg16634, Seu_jg18383, Seu_jg18393
Amaranthaceae	Suaeda aralocaspica	3	GOSA_00001612, GOSA_00012760, GOSA_00020394
Amaranthaceae	Suaeda glauca	5	Sgl45205, Sgl49973, Sgl54057, Sgl59394, Sgl82219
Amaranthaceae	Chenopodium album	5	gene:ENSEOMG00000008443, gene:ENSEOMG00000021078 ... gene:ENSEOMG00000028941, gene:ENSEOMG00000031977, gene:ENSEOMG00000040147
Amaranthaceae	Chenopodium quinoa	13	CQ.Regalona.r1.2AG0011790, CQ.Regalona.r1.2AG0017450 ... CQ.Regalona.r1.2BG0005740, CQ.Regalona.r1.2BG0005770, CQ.Regalona.r1.2BG0014950, CQ.Regalona.r1.7BG0000380, CQ.Regalona.r1.7BG0016370, CQ.Regalona.r1.7BG0017810, CQ.Regalona.r1.8BG0011440, CQ.Regalona.r1.8BG0019630, CQ.Regalona.r1.9AG0012870, CQ.Regalona.r1.9AG0012990, CQ.Regalona.r1.9AG0020090
Anacardiaceae	Pistacia vera	7	pistato.v30051160, pistato.v30051420, pistato.v30053570 ... pistato.v30079740, pistato.v30231360, pistato.v30248360, pistato.v30248540
Apiaceae	Apium graveolens	1	Ag4G01102
Arecaceae	Cocos nucifera	4	scaffold010649G000010, scaffold013905G000010 ... scaffold020636G000020, scaffold026009G000010
Arecaceae	Phoenix dactylifera	1	gene-LOC113463296
Asteraceae	Flaveria trinervia	1	Ftri7G04826
Casuarinaceae	Casuarina equisetifolia	8	Ceq01G0210, Ceq01G0305, Ceq01G0319, Ceq01G0332, Ceq01G0588 ... Ceq01G0734, Ceq01G0754, Ceq05G1246
Casuarinaceae	Casuarina glauca	12	Cgl01G0168, Cgl01G0273, Cgl01G0275, Cgl01G0279, Cgl01G0282 ... Cgl01G0913, Cgl02G3035, Cgl04G2658, Cgl05G0270, Cgl06G0120, Cgl06G0205, Cgl09G0198
Hydrocharitaceae	Thalassia testudinum	1	gene.Thate01g21220
Malvaceae	Hibiscus hamabo Siebold & Zucc.	1	nbisL1-mrna-4453
Nitrariaceae	Nitraria sibirica	5	evm.TU.LG03.1911, evm.TU.LG05.1168, evm.TU.LG05.1170 ... evm.TU.LG06.1169, evm.TU.LG06.1185
Plantaginaceae	Plantago ovata	10	Pov_00009514, Pov_00016723, Pov_00016901, Pov_00019932 ... Pov_00020389, Pov_00023077, Pov_00025341, Pov_00034141, Pov_00034143, Pov_00041304
Poaceae	Echinochloa crus-galli	26	AH04.2257, AH04.2258, AH04.2259, AH04.2313, AH06.1, AH08.414 ... AH09.823, AH09.825, AH09.826, BH02.4507, BH04.931, BH04.948, BH05.3486, BH08.423, BH08.937, BH08.943, BH09.817, CH02.1404, CH04.1104, CH04.401, CH04.881, CH08.1067, CH08.1068, CH08.497, CH09.878, CH09.879
Poaceae	Eleusine coracana subsp. coracana	22	gene-QOZ80_1AG0003970, gene-QOZ80_1BG0052390 ... gene-QOZ80_1BG0052410, gene-QOZ80_2AG0114160, gene-QOZ80_3BG0269440, gene-QOZ80_4AG0301510, gene-QOZ80_5AG0391590, gene-QOZ80_5AG0396920, gene-QOZ80_5BG0445450, gene-QOZ80_5BG0445460, gene-QOZ80_7AG0552230, gene-QOZ80_7BG0583230, gene-QOZ80_7BG0583240, gene-QOZ80_7BG0583260, gene-QOZ80_7BG0584230, gene-QOZ80_7BG0588680, gene-QOZ80_8AG0624410, gene-QOZ80_8AG0631400, gene-QOZ80_8AG0631410, gene-QOZ80_9AG0678340, gene-QOZ80_9AG0678350, gene-QOZ80_9AG0684150
Poaceae	Hordeum vulgare	10	HORVU.MOREX.r3.1HG0094070.1, HORVU.MOREX.r3.1HG0094080.1 ... HORVU.MOREX.r3.1HG0094090.1, HORVU.MOREX.r3.2HG0216800.1, HORVU.MOREX.r3.2HG0216840.1.CDS1, HORVU.MOREX.r3.2HG0216880.1, HORVU.MOREX.r3.5HG0420380.1, HORVU.MOREX.r3.6HG0630800.1, HORVU.MOREX.r3.6HG0630920.1, HORVU.MOREX.r3.6HG0633870.1
Poaceae	Lolium multiflorum	16	gene-QYE76_006631, gene-QYE76_015091, gene-QYE76_015099 ... gene-QYE76_015100, gene-QYE76_015101, gene-QYE76_015102, gene-QYE76_015103, gene-QYE76_026485, gene-QYE76_057808, gene-QYE76_058082, gene-QYE76_062972, gene-QYE76_063664, gene-QYE76_071388, gene-QYE76_071389, gene-QYE76_071390, gene-QYE76_071391
Poaceae	Oryza coarctata	7	Oco04G014780, Oco12G013910, Oco15G005230, Oco18G001980 ... Oco18G001990, Oco21G003130, Oco21G003170
Poaceae	Oryza sativa	11	LOC_Os02g38386.1, LOC_Os02g38392.1, LOC_Os05g23255.1 ... LOC_Os08g16450.1, LOC_Os08g16460.1, LOC_Os11g10550.1, LOC_Os11g10570.1, LOC_Os11g10610.1, LOC_Os11g10620.1, LOC_Os11g10760.1, LOC_Os11g10770.1
Poaceae	Paspalum vaginatum	16	gene-BS78_03G310900, gene-BS78_04G184800, gene-BS78_K184500 ... gene-BS78_05G016000, gene-BS78_05G065500, gene-BS78_05G139700, gene-BS78_05G139900, gene-BS78_05G186200, gene-BS78_05G223900, gene-BS78_05G224000, gene-BS78_05G224200, gene-BS78_07G066000, gene-BS78_08G046200, gene-BS78_K184700, gene-BS78_K259900, gene-BS78_K260000
Poaceae	Puccinellia tenuiflora	16	Pt_Chr0500612, Pt_Chr0500614, Pt_Chr0500615, Pt_Chr0500616 ... Pt_Chr0500833, Pt_Chr0505841, Pt_Chr0505843, Pt_Chr0505844, Pt_Chr0505846, Pt_Chr0505850, Pt_Chr0505853, Pt_Chr0505855, Pt_Chr0505856, Pt_Chr0601196, Pt_Chr0603888, Pt_Chr0704763
Poaceae	Sporobolus alterniflorus	20	Chr03G001180, Chr04G014910, Chr04G014920, Chr04G023030 ... Chr08G001250, Chr08G003960, Chr15G009980, Chr15G009990, Chr17G005490, Chr17G010630, Chr19G018750, Chr20G004080, Chr24G002570, Chr25G015980, Chr25G016940, Chr25G016950, Chr25G016960, Chr25G016980, Chr30G015830, Chr31G003490
Poaceae	Thinopyrum elongatum	18	Tel1E01G111200, Tel1E01G111400, Tel1E01G732500 ... Tel2E01G775600, Tel3E01G887900, Tel4E01G619400, Tel5E01G016200, Tel5E01G770900, Tel5E01G771000, Tel6E01G110200, Tel6E01G729100, Tel6E01G729200, Tel6E01G729500, Tel6E01G730600, Tel6E01G731100, Tel7E01G145700, Tel7E01G171800, Tel7E01G171900
Poaceae	Triticum dicoccoides	38	gene_TRIDC1AG063640, gene_TRIDC1AG063650 ... gene_TRIDC1AG063700, gene_TRIDC1AG063710, gene_TRIDC1BG065740, gene_TRIDC1BG065750, gene_TRIDC1BG065760, gene_TRIDC1BG072890, gene_TRIDC1BG072910, gene_TRIDC1BG072940, gene_TRIDC2AG076590, gene_TRIDC2AG082340, gene_TRIDC2AG082360, gene_TRIDC2BG090420, gene_TRIDC2BG090430, gene_TRIDC3BG085760, gene_TRIDC4AG003670, gene_TRIDC4AG003680, gene_TRIDC4AG062210, gene_TRIDC4BG062450, gene_TRIDC4BG062460, gene_TRIDC4BG062480, gene_TRIDC5AG001050, gene_TRIDC5AG010590, gene_TRIDC5AG045970, gene_TRIDC5BG001030, gene_TRIDC5BG001080, gene_TRIDC5BG001090, gene_TRIDC5BG001140, gene_TRIDC5BG009710, gene_TRIDC5BG012370, gene_TRIDC5BG074650, gene_TRIDC6AG058910, gene_TRIDC6BG016590, gene_TRIDC6BG069670, gene_TRIDC6BG069710, gene_TRIDC7AG007600, gene_TRIDC7AG008660
Poaceae	Triticum aestivum	67	TraesCS1A02G433600.1, TraesCS1A02G434000.1 ... TraesCS1B02G416200.1, TraesCS1B02G442200.1, TraesCS1B02G469500.1, TraesCS1B02G469700.1, TraesCS1B02G470000.1, TraesCS1B02G470100.1, TraesCS1B02G470300.1, TraesCS1B02G470400.1.cds1, TraesCS1B02G470500.1, TraesCS1B02G470600.1, TraesCS1D02G419600.1, TraesCS1D02G443300.1, TraesCS1D02G443400.1, TraesCS1D02G443551.1.cds1, TraesCS2B02G161100.1, TraesCS2B02G624900.2, TraesCS2D02G573600.1, TraesCS2D02G573800.1, TraesCS2D02G573900.1, TraesCS3B02G593900.3, TraesCS3D02G531700.1, TraesCS4A02G026300.1, TraesCS4A02G380900.1.cds1, TraesCS4A02G389400.1.cds1, TraesCS4B02G382600.1, TraesCS4D02G103400.1, TraesCS5A02G007200.1.cds1, TraesCS5B02G005700.1, TraesCS5B02G058900.1, TraesCS5B02G059000.1, TraesCS5B02G499300.1.cds1, TraesCS5B02G499400.1.cds1, TraesCS5B02G499500.1, TraesCS5D02G005300.1, TraesCS5D02G005400.1, TraesCS5D02G005416.1.cds1, TraesCS5D02G005600.1, TraesCS5D02G029000.1, TraesCS5D02G499200.1, TraesCS5D02G499300.1, TraesCS5D02G499400.1, TraesCS5D02G499500.1.cds1, TraesCS5D02G499600.1.cds1, TraesCS6A02G400900.1, TraesCS6A02G401000.1, TraesCS6B02G117100.2, TraesCS6B02G440900.1, TraesCS6B02G441200.1, TraesCS6B02G442100.1, TraesCS6B02G442200.1, TraesCS6B02G443000.1, TraesCS6B02G443300.1, TraesCS6D02G384900.1, TraesCS7A02G069600.1, TraesCS7A02G069800.1, TraesCS7D02G065100.1, TraesCS7D02G065200.1, TraesCS7D02G065500.1, TraesCSU02G113800.1, TraesCSU02G132000.1, TraesCSU02G141500.1, TraesCSU02G153000.1, TraesCSU02G153200.1, TraesCSU02G160400.1, TraesCSU02G201600.1
Poaceae	Zea mays	1	Zm00001eb116510_P001
Poaceae	Zoysia japonica	8	nbis-gene-23321, nbis-gene-3245, nbis-gene-32534 ... nbis-gene-37568, nbis-gene-48962, nbis-gene-50430, nbis-gene-54870, nbis-gene-55392
Poaceae	Zoysia macrostachya	6	Zma_g19194, Zma_g19315, Zma_g20769, Zma_g20770, Zma_g5905 ... Zma_g7335
Portulacaceae	Portulaca oleracea	2	evm.TU.LG04.2254, evm.TU.LG17.598
Posidoniaceae	Posidonia oceanica	1	gene.Posoc04g21290
Rhizophoraceae	Carallia pectinifolia	2	nbisL1-mrna-27940, nbisL1-mrna-28166
Rhizophoraceae	Ceriops tagal	2	nbisL1-mrna-10305, nbisL1-mrna-2664
Rhizophoraceae	Kandelia candel	1	add.evm.TU.utg000023l.130
Rhizophoraceae	Kandelia obovata	3	Maker00008233, Maker00010114, Maker00019105
Rhizophoraceae	Rhizophora mangle	4	nbisL1-mrna-21450, nbisL1-mrna-21453, nbisL1-mrna-21719 ... nbisL1-mrna-22196
Salicaceae	Populus euphratica	9	populus_peu13050, populus_peu13051, populus_peu13065 ... populus_peu13084, populus_peu13085, populus_peu23925, populus_peu24698, populus_peu24712, populus_peu27828
Tamaricaceae	Reaumuria soongarica	4	MSTRG.13832_chr08_+, MSTRG.13848_chr08_-, STRG.24360_chr08_- ... STRG.8738_chr03_+