Basic Information
Locus ID:
gene-BS78_05G050900
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Major Facilitator Superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 4903917 | 4908359 | - | gene-BS78_05G050900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.45 | 49,331.58 Da | 38.89 | 116.77 | 0.68 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17330 | MFS_SLC46_TetA_like | 20 | 423 | 3.91217E-45 | - |
| Pfam | PF07690 | Major Facilitator Superfamily | 22 | 384 | 2.4E-23 | IPR011701 |
| SUPERFAMILY | SSF103473 | MFS general substrate transporter | 60 | 430 | 5.23E-34 | IPR036259 |
| Gene3D | G3DSA:1.20.1250.20 | MFS general substrate transporter like domains | 14 | 429 | 3.7E-31 | IPR036259 |
| ProSiteProfiles | PS50850 | Major facilitator superfamily (MFS) profile. | 1 | 430 | 15.184481 | IPR020846 |
| ProSitePatterns | PS00216 | Sugar transport proteins signature 1. | 79 | 96 | - | IPR005829 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G42210.1 | Major facilitator superfamily protein. | 0 |
| RefSeq | XP_034606617.1 | tetracycline resistance protein, class H-like [Setaria viridis] | 0 |
| TrEMBL | A0A4U6TFG2 | MFS domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_8G033100v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology