Basic Information
Locus ID:
gene-BS78_05G031600
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Non-specific serine threonine protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 2976862 | 2981078 | + | gene-BS78_05G031600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.86 | 50,447.27 Da | 38.80 | 85.50 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14663 | STKc_SnRK3 | 12 | 267 | 2.25816E-175 | - |
| CDD | cd12195 | CIPK_C | 312 | 426 | 8.45275E-54 | - |
| Pfam | PF03822 | NAF domain | 308 | 367 | 4.3E-23 | IPR004041 |
| Pfam | PF00069 | Protein kinase domain | 13 | 268 | 4.3E-74 | IPR000719 |
| SUPERFAMILY | SSF103243 | KA1-like | 338 | 425 | 4.25E-5 | IPR028375 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 9 | 287 | 7.82E-93 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 93 | 275 | 1.4E-60 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 2 | 92 | 1.2E-33 | - |
| Gene3D | G3DSA:3.30.310.80 | Kinase associated domain 1, KA1 | 305 | 430 | 1.8E-55 | - |
| SMART | SM00220 | serkin_6 | 13 | 268 | 2.2E-109 | IPR000719 |
| ProSiteProfiles | PS50816 | NAF domain profile. | 306 | 330 | 13.107116 | IPR018451 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 13 | 268 | 52.102882 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 19 | 42 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 132 | 144 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G26980.3 | CBL-interacting protein kinase 3. encodes a serine-threonine protein kinase whose expression increases in response to abscisic acid, cold, drought, high salt, and wounding conditions. The gene is expressed in developing seeds and seedlings. Lines carrying a T-DNA insertions have reduced germination efficiency and expression of cold, high-salt, and abscisic acid marker genes are altered, but not drought-response markers. | 0 |
| RefSeq | XP_025828386.1 | CBL-interacting protein kinase 32 [Panicum hallii] | 0 |
| Q2QY53 | CBL-interacting protein kinase 32 OS=Oryza sativa subsp. japonica OX=39947 GN=CIPK32 PE=2 SV=2 | 0 | |
| TrEMBL | A0A2S3IC69 | non-specific serine/threonine protein kinase OS=Panicum hallii OX=206008 GN=PAHAL_8G020100 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology