Basic Information
Locus ID:
gene-BS78_05G012700
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Short Name:
WNK5
Description:
intracellular signal transduction
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 1086571 | 1093476 | - | gene-BS78_05G012700 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.49 | 75,053.16 Da | 60.38 | 62.24 | -0.64 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13983 | STKc_WNK | 35 | 296 | 1.94313E-155 | - |
| Pfam | PF00069 | Protein kinase domain | 40 | 296 | 1.0E-42 | IPR000719 |
| Pfam | PF12202 | Oxidative-stress-responsive kinase 1 C-terminal domain | 388 | 429 | 2.1E-5 | IPR024678 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 39 | 333 | 5.13E-63 | IPR011009 |
| Gene3D | G3DSA:3.10.20.90 | - | 360 | 440 | 2.7E-7 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 22 | 118 | 8.4E-28 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 120 | 303 | 9.7E-47 | - |
| SMART | SM00220 | serkin_6 | 37 | 296 | 1.5E-54 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 37 | 296 | 37.643803 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 161 | 173 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 599 | 619 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 653 | 684 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 328 | 362 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 525 | 622 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 525 | 539 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51630.1 | with no lysine (K) kinase 5. Encodes a member of the WNK family (9 members in all) of protein kinases, the structural design of which is clearly distinct from those of other known protein kinases, such as receptor-like kinases and mitogen-activated protein kinases. | 0 |
| RefSeq | XP_039835417.1 | probable serine/threonine-protein kinase WNK7 isoform X1 [Panicum virgatum] | 0 |
| Q2RBE3 | Probable serine/threonine-protein kinase WNK7 OS=Oryza sativa subsp. japonica OX=39947 GN=WNK7 PE=2 SV=2 | 0 | |
| TrEMBL | A0A8T0UQV1 | Protein kinase domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_3KG042600 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology