Basic Information
Locus ID:
gene-BS78_04G322200
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 45167840 | 45172513 | - | gene-BS78_04G322200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.63 | 48,585.33 Da | 39.81 | 85.67 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 90 | 368 | 6.57804E-89 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 89 | 362 | 6.7E-50 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 59 | 364 | 6.26E-81 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 170 | 374 | 1.8E-64 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 65 | 169 | 5.5E-30 | - |
| SMART | SM00220 | serkin_6 | 84 | 369 | 1.2E-42 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 84 | 369 | 41.558918 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 90 | 118 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G09830.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_039779245.1 | serine/threonine-protein kinase PCRK1-like [Panicum virgatum] | 0 |
| Q9SF86 | Serine/threonine-protein kinase PCRK1 OS=Arabidopsis thaliana OX=3702 GN=PCRK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2S3GUL6 | Protein kinase domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_1G450000 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology