Basic Information
Locus ID:
gene-BS78_04G307600
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Amino acid permease
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 44064212 | 44067060 | + | gene-BS78_04G307600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.57 | 62,004.02 Da | 32.70 | 102.03 | 0.61 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13520 | Amino acid permease | 69 | 444 | 8.6E-38 | IPR002293 |
| Pfam | PF13906 | C-terminus of AA_permease | 510 | 559 | 4.6E-15 | IPR029485 |
| Gene3D | G3DSA:1.20.1740.10 | Amino acid/polyamine transporter I | 65 | 481 | 1.3E-80 | - |
| PIRSF | PIRSF006060 | AA_transporter | 46 | 576 | 4.0E-63 | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G17120.1 | cationic amino acid transporter 8. Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Does not mediate efficient uptake of basic amino acids in yeast or Xenopus systems but can transport neutral and acidic amino acid analogs. | 0 |
| RefSeq | XP_034589451.1 | cationic amino acid transporter 8, vacuolar-like [Setaria viridis] | 0 |
| Q9SHH0 | Cationic amino acid transporter 8, vacuolar OS=Arabidopsis thaliana OX=3702 GN=CAT8 PE=2 SV=1 | 0 | |
| TrEMBL | A0A1E5VL35 | Cationic amino acid transporter 8, vacuolar OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0013199 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology