halophFGD

Basic Information

Locus ID: gene-BS78_04G206600

Species & Taxonomic ID: Paspalum vaginatum & 158149

Genome Assembly: GCA_026573395.1

Description:

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr4	35494851	35498039	+	gene-BS78_04G206600

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.66	45,959.98 Da	37.47	92.57	0.06

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
SUPERFAMILY	SSF81383	F-box domain	25	84	8.11E-7	IPR036047
Gene3D	G3DSA:1.20.1280.50	-	24	75	3.7E-6	-
MobiDBLite	mobidb-lite	consensus disorder prediction	9	27	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	1	27	-	-

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_025822383.1	uncharacterized protein LOC112898230 [Panicum hallii]	0
TrEMBL	A0A811PI69	DUF295 domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS28549 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Echinochloa crus-galli	35	AH01.1293, AH01.161, AH03.3402, AH03.3403, AH03.3408 ... AH03.3412, AH03.3533, AH07.2751, AH07.2838, AH07.352, BH03.20, BH03.3610, BH03.3632, BH03.3635, BH03.3636, BH03.3645, BH03.3646, BH03.3647, BH03.3648, BH03.3655, BH03.3658, BH03.3914, BH07.3579, BH07.457, CH01.3317, CH01.481, CH03.3840, CH03.3841, CH03.3842, CH03.3843, CH03.3847, CH03.3850, CH07.2620, CH07.352, Contig181.178
Poaceae	Eleusine coracana subsp. coracana	21	gene-QOZ80_2AG0101160, gene-QOZ80_2AG0103070 ... gene-QOZ80_2BG0154530, gene-QOZ80_3AG0218720, gene-QOZ80_3BG0291830, gene-QOZ80_3BG0291860, gene-QOZ80_7AG0573490, gene-QOZ80_7AG0573510, gene-QOZ80_7AG0573530, gene-QOZ80_7AG0573600, gene-QOZ80_7AG0573620, gene-QOZ80_7AG0573700, gene-QOZ80_7AG0573710, gene-QOZ80_7AG0573770, gene-QOZ80_7AG0574200, gene-QOZ80_7AG0574440, gene-QOZ80_7BG0604890, gene-QOZ80_7BG0604940, gene-QOZ80_7BG0604990, gene-QOZ80_7BG0605040, gene-QOZ80_7BG0605470
Poaceae	Hordeum vulgare	14	HORVU.MOREX.r3.1HG0023710.1.CDS1 ... HORVU.MOREX.r3.1HG0069590.1, HORVU.MOREX.r3.2HG0113130.1, HORVU.MOREX.r3.3HG0250590.1.CDS1, HORVU.MOREX.r3.3HG0308660.1.CDS1, HORVU.MOREX.r3.3HG0310420.1.CDS1, HORVU.MOREX.r3.3HG0326540.1.CDS1, HORVU.MOREX.r3.3HG0326600.1.CDS1, HORVU.MOREX.r3.3HG0326630.1.CDS1, HORVU.MOREX.r3.3HG0326680.1.CDS1, HORVU.MOREX.r3.5HG0466100.1.CDS1, HORVU.MOREX.r3.5HG0517890.1.CDS1, HORVU.MOREX.r3.6HG0620800.1.CDS1, HORVU.MOREX.r3.7HG0712670.1.CDS1
Poaceae	Lolium multiflorum	22	gene-QYE76_008733, gene-QYE76_025107, gene-QYE76_029964 ... gene-QYE76_029966, gene-QYE76_029976, gene-QYE76_029979, gene-QYE76_038729, gene-QYE76_038810, gene-QYE76_038873, gene-QYE76_040101, gene-QYE76_040103, gene-QYE76_040107, gene-QYE76_040548, gene-QYE76_050172, gene-QYE76_053294, gene-QYE76_054431, gene-QYE76_060850, gene-QYE76_061374, gene-QYE76_061460, gene-QYE76_061461, gene-QYE76_071671, gene-QYE76_071673
Poaceae	Oryza coarctata	8	Oco08G002540, Oco13G009050, Oco13G010880, Oco13G011070 ... Oco14G009470, Oco14G011620, Oco14G011660, Oco14G011820
Poaceae	Oryza sativa	12	LOC_Os03g57830.1, LOC_Os05g03210.1, LOC_Os05g12080.1 ... LOC_Os05g45470.1, LOC_Os07g25790.1, LOC_Os07g34620.1, LOC_Os07g38480.1, LOC_Os07g38980.1, LOC_Os07g39000.1, LOC_Os07g39040.1, LOC_Os07g39370.1, LOC_Os10g41850.1
Poaceae	Paspalum vaginatum	8	gene-BS78_01G237600, gene-BS78_01G252300 ... gene-BS78_02G322800, gene-BS78_02G390800, gene-BS78_02G390900, gene-BS78_04G206600, gene-BS78_06G213700, gene-BS78_10G158900
Poaceae	Puccinellia tenuiflora	31	Pt_Chr0103037, Pt_Chr0103039, Pt_Chr0103041, Pt_Chr0103044 ... Pt_Chr0104468, Pt_Chr0108086, Pt_Chr0206737, Pt_Chr0304540, Pt_Chr0304576, Pt_Chr0304613, Pt_Chr0305178, Pt_Chr0404899, Pt_Chr0404901, Pt_Chr0404902, Pt_Chr0404903, Pt_Chr0404909, Pt_Chr0500205, Pt_Chr0500263, Pt_Chr0502246, Pt_Chr0600143, Pt_Chr0600970, Pt_Chr0600971, Pt_Chr0600995, Pt_Chr0600996, Pt_Chr0601001, Pt_Chr0601002, Pt_Chr0601005, Pt_Chr0601006, Pt_Chr0601534, Pt_Chr0605861, Pt_Chr0704343
Poaceae	Sporobolus alterniflorus	4	Chr17G014940, Chr19G003580, Chr24G011050, Chr27G013670
Poaceae	Thinopyrum elongatum	13	Tel2E01G1055200, Tel2E01G202700, Tel2E01G238300 ... Tel3E01G227400, Tel3E01G305200, Tel3E01G869200, Tel3E01G869500, Tel3E01G871000, Tel5E01G054600, Tel5E01G674900, Tel6E01G603200, Tel7E01G431200, Tel7E01G431300
Poaceae	Triticum dicoccoides	6	gene_TRIDC2AG010800, gene_TRIDC2BG013120 ... gene_TRIDC2BG013140, gene_TRIDC3AG073340, gene_TRIDC5AG003200, gene_TRIDC5AG062240
Poaceae	Triticum aestivum	41	TraesCS2A02G093900.1.cds1, TraesCS2A02G533600.1 ... TraesCS2B02G108400.1, TraesCS2B02G108500.1, TraesCS2B02G108600.1, TraesCS2D02G111000.1.cds1, TraesCS3A02G426900.1, TraesCS3A02G452700.1.cds1, TraesCS3A02G518200.1.cds1, TraesCS3B02G442600.1, TraesCS3B02G463600.1, TraesCS3B02G464800.1.cds1, TraesCS3B02G489900.1, TraesCS3B02G490100.1.cds1, TraesCS3D02G422400.1, TraesCS3D02G525400.1.cds1, TraesCS3D02G525500.1.cds1, TraesCS3D02G525600.1.cds1, TraesCS4B02G201300.1, TraesCS5A02G431700.2, TraesCS5A02G431800.1.cds1, TraesCS5B02G433400.1.cds1, TraesCS5B02G433500.1.cds1, TraesCS5B02G433900.1.cds1, TraesCS5D02G431200.1.cds1, TraesCS5D02G439400.1.cds1, TraesCS5D02G439700.1.cds1, TraesCS6B02G274700.1.cds1, TraesCS6B02G370700.1, TraesCS6B02G371100.1, TraesCS6D02G232500.1.cds1, TraesCS7A02G244500.1.cds1, TraesCS7A02G443300.1.cds1, TraesCS7B02G072200.1.cds1, TraesCS7B02G342100.2.cds1, TraesCS7D02G243100.1.cds1, TraesCS7D02G344600.1.cds1, TraesCS7D02G432500.1.cds1, TraesCSU02G096800.1.cds1, TraesCSU02G226800.1, TraesCSU02G251700.1
Poaceae	Zea mays	3	Zm00001eb037910_P001, Zm00001eb142070_P001 ... Zm00001eb330670_P001