Basic Information
Locus ID:
gene-BS78_04G181000
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 33018474 | 33024643 | + | gene-BS78_04G181000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.70 | 39,738.25 Da | 47.85 | 86.14 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 32 | 286 | 6.50179E-107 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 30 | 286 | 3.1E-57 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 18 | 313 | 9.04E-74 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 14 | 105 | 3.4E-21 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 107 | 310 | 4.6E-52 | - |
| SMART | SM00220 | serkin_6 | 26 | 290 | 1.2E-64 | IPR000719 |
| PIRSF | PIRSF000615 | TyrPK_CSF1-R | 119 | 322 | 2.1E-21 | - |
| PIRSF | PIRSF000615 | TyrPK_CSF1-R | 11 | 129 | 0.013 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 26 | 290 | 42.746174 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 146 | 158 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 32 | 53 | - | IPR017441 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 140 | 158 | 4.7E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 214 | 236 | 4.7E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 102 | 115 | 4.7E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 257 | 279 | 4.7E-12 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 308 | 337 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 308 | 327 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G50180.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_008676838.1 | putative protein kinase superfamily protein isoform X1 [Zea mays] | 0 |
| Q9ZQ31 | Serine/threonine-protein kinase STY13 OS=Arabidopsis thaliana OX=3702 GN=STY13 PE=1 SV=2 | 0 | |
| TrEMBL | A0A835AF46 | Protein kinase domain-containing protein OS=Digitaria exilis OX=1010633 GN=HU200_062388 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology