Basic Information
Locus ID:
gene-BS78_04G166500
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Kelch motif
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 31731475 | 31733104 | + | gene-BS78_04G166500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.66 | 42,535.26 Da | 43.42 | 64.17 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 53 | 88 | 1.7E-5 | IPR001810 |
| Pfam | PF01344 | Kelch motif | 153 | 198 | 8.2E-5 | IPR006652 |
| Pfam | PF01344 | Kelch motif | 200 | 246 | 6.3E-11 | IPR006652 |
| SUPERFAMILY | SSF81383 | F-box domain | 47 | 95 | 1.23E-6 | IPR036047 |
| SUPERFAMILY | SSF117281 | Kelch motif | 119 | 388 | 9.02E-33 | IPR015915 |
| Gene3D | G3DSA:2.120.10.80 | - | 92 | 392 | 7.0E-31 | IPR015915 |
| SMART | SM00256 | fbox_2 | 55 | 95 | 2.2E-5 | IPR001810 |
| SMART | SM00612 | kelc_smart | 212 | 259 | 0.0071 | IPR006652 |
| SMART | SM00612 | kelc_smart | 163 | 211 | 6.0E-5 | IPR006652 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G44130.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | XP_025794959.1 | F-box/kelch-repeat protein SKIP20-like [Panicum hallii] | 0 |
| O80582 | F-box/kelch-repeat protein At2g44130 OS=Arabidopsis thaliana OX=3702 GN=At2g44130 PE=2 SV=2 | 0 | |
| TrEMBL | A0A2T7F7V2 | F-box domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_1G267200 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology